RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SIM2Q14190 667 aaPredicted RBP13.55□□□□□ -0.24
COPS7A-221ENST00000546229 ITPRIPL2Q3MIP1 535 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 ARHGAP15Q53QZ3 475 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 TRIM68Q6AZZ1 485 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 ARMCX5Q6P1M9 558 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 PRR23BQ6ZRT6 265 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 OSTM1Q86WC4 334 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 BRSK2Q8IWQ3 736 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 PDCL2Q8N4E4 241 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 GIPC2Q8TF65 315 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 FBRSL1Q9HCM7 1045 aaKnown RBP13.55□□□□□ -0.24
COPS7A-221ENST00000546229 SIX4Q9UIU6 781 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 PTPRJQ12913 1337 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 SPEGQ15772 3267 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 ZNF638Q14966 1978 aaKnown RBP13.54□□□□□ -0.24
COPS7A-221ENST00000546229 A0A087X0B3 334 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 KPNA7A9QM74 516 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 H3BQV1 296 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 TRDMT1O14717 391 aaKnown RBP13.54□□□□□ -0.24
COPS7A-221ENST00000546229 TM4SF5O14894 197 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 HCRTO43612 131 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 NOL4O94818 638 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 CHRM1P11229 460 aaPredicted RBP13.54□□□□□ -0.24
COPS7A-221ENST00000546229 ARSAP15289 507 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 RAP1GAPP47736 663 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 USP4Q13107 963 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 CUL4AQ13619 759 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 ZNF268Q14587 947 aaPredicted RBP13.54□□□□□ -0.24
COPS7A-221ENST00000546229 VEPH1Q14D04 833 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 L1TD1Q5T7N2 865 aaKnown RBP13.54□□□□□ -0.24
COPS7A-221ENST00000546229 SLFN12LQ6IEE8 588 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 NT5DC4Q86YG4 428 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 TRMT2BQ96GJ1 504 aaKnown RBP13.54□□□□□ -0.24
COPS7A-221ENST00000546229 MYRFLQ96LU7 910 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 SLC22A12Q96S37 553 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 OLFML3Q9NRN5 406 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 POLR3BQ9NW08 1133 aaPredicted RBP13.54□□□□□ -0.24
COPS7A-221ENST00000546229 ABI2Q9NYB9 513 aaPredicted RBP13.54□□□□□ -0.24
COPS7A-221ENST00000546229 STK17AQ9UEE5 414 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 ZMYM5Q9UJ78 669 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 CLIC4Q9Y696 253 aa13.54□□□□□ -0.24
COPS7A-221ENST00000546229 MORC2Q9Y6X9 1032 aaPredicted RBP13.54□□□□□ -0.24
COPS7A-221ENST00000546229 CCDC163A0A0D9SF12 145 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 SOBPA7XYQ1 873 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 GABRDO14764 452 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 IL18RAPO95256 599 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 DDX6P26196 483 aaKnown RBP eCLIP13.53□□□□□ -0.24
COPS7A-221ENST00000546229 POLR2BP30876 1174 aaKnown RBP13.53□□□□□ -0.24
COPS7A-221ENST00000546229 RESTQ13127 1097 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 RUNX3Q13761 415 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 ZNF77Q15935 545 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 SV2CQ496J9 727 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 PLA2G2CQ5R387 149 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 SDHAF4Q5VUM1 108 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 TXNDC8Q6A555 127 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 HEATR6Q6AI08 1181 aaKnown RBP13.53□□□□□ -0.24
COPS7A-221ENST00000546229 MAB21L3Q8N8X9 362 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 ZHX3Q9H4I2 956 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 KIF9Q9HAQ2 790 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 ABCB6Q9NP58 842 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 GKN1Q9NS71 199 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 RXFP3Q9NSD7 469 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 GDAP2Q9NXN4 497 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 SEL1LQ9UBV2 794 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 RAB23Q9ULC3 237 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 SMC3Q9UQE7 1217 aa13.53□□□□□ -0.24
COPS7A-221ENST00000546229 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.52□□□□□ -0.25
COPS7A-221ENST00000546229 DPYSL4O14531 572 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 KRT37O76014 449 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 EPN2O95208 641 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 EGFP01133 1207 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 ITGB3P05106 788 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 KRT18P05783 430 aaKnown RBP13.52□□□□□ -0.25
COPS7A-221ENST00000546229 LIMK1P53667 647 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 GAB4Q2WGN9 574 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 INTS6LQ5JSJ4 861 aaKnown RBP13.52□□□□□ -0.25
COPS7A-221ENST00000546229 LARP1BQ659C4 914 aaKnown RBP13.52□□□□□ -0.25
COPS7A-221ENST00000546229 DYMQ7RTS9 669 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.52□□□□□ -0.25
COPS7A-221ENST00000546229 MON1AQ86VX9 555 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 LRRC52Q8N7C0 313 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 GAB3Q8WWW8 586 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 POMGNT1Q8WZA1 660 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 SAAL1Q96ER3 474 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 ZNF560Q96MR9 790 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 CLIC6Q96NY7 704 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 CBWD1Q9BRT8 395 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 EBF3Q9H4W6 596 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 TDP1Q9NUW8 608 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 GCNT4Q9P109 453 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 PCDHB5Q9Y5E4 795 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 SRPRBQ9Y5M8 271 aaKnown RBP13.52□□□□□ -0.25
COPS7A-221ENST00000546229 ATG2BQ96BY7 2078 aa13.52□□□□□ -0.25
COPS7A-221ENST00000546229 ACAT1P24752 427 aaKnown RBP13.51□□□□□ -0.25
COPS7A-221ENST00000546229 CYP2F1P24903 491 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 PNPLA4P41247 253 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 PXNP49023 591 aaPredicted RBP13.51□□□□□ -0.25
COPS7A-221ENST00000546229 ZXDBP98169 803 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 SF3A2Q15428 464 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms