RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 SYT12Q8IV01 421 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 NAXDQ8IW45 347 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 SRRM1Q8IYB3 904 aaKnown RBP7.54□□□□□ -1.2
LDHA-223ENST00000545215 IFNL3Q8IZI9 196 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 MINDY1Q8N5J2 469 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 FGF11Q92914 225 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 FAM227BQ96M60 508 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 RMDN3Q96TC7 470 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 DSCC1Q9BVC3 393 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 NRSN2Q9GZP1 204 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 MAF1Q9H063 256 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 NAPBQ9H115 298 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 UPF2Q9HAU5 1272 aaKnown RBP7.54□□□□□ -1.2
LDHA-223ENST00000545215 RXFP1Q9HBX9 757 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 CPNE5Q9HCH3 593 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 FANCLQ9NW38 375 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 GDE1Q9NZC3 331 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 EBF1Q9UH73 591 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 PNMA2Q9UL42 364 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 KCNH3Q9ULD8 1083 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 SSX2IPQ9Y2D8 614 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 BOD1L1Q8NFC6 3051 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 ABCA7Q8IZY2 2146 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 MYH7P12883 1935 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 CSMD1Q96PZ7 3565 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 CRYBG3Q68DQ2 2970 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 A0A0D9SFI3 127 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 NOP56O00567 594 aaKnown RBP7.53□□□□□ -1.2
LDHA-223ENST00000545215 TGM5O43548 720 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 ATG13O75143 517 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 GJB3O75712 270 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 GJB6O95452 261 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 ITGB2P05107 769 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 TSPY3P0CV98 308 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 TSPY8P0CW00 308 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 PCP11498 1178 aaKnown RBP7.53□□□□□ -1.2
LDHA-223ENST00000545215 FCARP24071 287 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 DHPSP49366 369 aaPredicted RBP7.53□□□□□ -1.2
LDHA-223ENST00000545215 AK2P54819 239 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 NFKB2Q00653 900 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 KRT76Q01546 638 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 TLE1Q04724 770 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 GFPT1Q06210 699 aaPredicted RBP7.53□□□□□ -1.2
LDHA-223ENST00000545215 CCDC173Q0VFZ6 552 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 SMAD1Q15797 465 aaKnown RBP7.53□□□□□ -1.2
LDHA-223ENST00000545215 ECHDC2Q86YB7 292 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 PALB2Q86YC2 1186 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 NME8Q8N427 588 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 NEDD1Q8NHV4 660 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 CHMP4CQ96CF2 233 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 SEC62Q99442 399 aaKnown RBP7.53□□□□□ -1.2
LDHA-223ENST00000545215 CSRNP2Q9H175 543 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 STARD5Q9NSY2 213 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 COL20A1Q9P218 1284 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 THADAQ6YHU6 1953 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 HIVEP1P15822 2718 aa7.53□□□□□ -1.2
LDHA-223ENST00000545215 ELOA3CA0A087WX78 387 aaPredicted RBP7.52□□□□□ -1.2
LDHA-223ENST00000545215 A0A1W2PQH9 124 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 ESYT3A0FGR9 886 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 ELOA3DA6NLF2 546 aaPredicted RBP7.52□□□□□ -1.2
LDHA-223ENST00000545215 ARNTLO00327 626 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 GDI1P31150 447 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 TFAP4Q01664 338 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 PPARAQ07869 468 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 ELOA3BQ3SY89 546 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 C2orf27AQ580R0 203 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 TXNDC11Q6PKC3 985 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 BTNL9Q6UXG8 535 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 EXD3Q8N9H8 876 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 ELOA3Q8NG57 546 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 GPBAR1Q8TDU6 330 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 SYTL5Q8TDW5 730 aaPredicted RBP7.52□□□□□ -1.2
LDHA-223ENST00000545215 TBC1D5Q92609 795 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 ZBTB10Q96DT7 871 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 MCRS1Q96EZ8 462 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 TM9SF2Q99805 663 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 C8orf33Q9H7E9 229 aaPredicted RBP7.52□□□□□ -1.2
LDHA-223ENST00000545215 NRDE2Q9H7Z3 1164 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 FSCN3Q9NQT6 498 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 PCOLCE2Q9UKZ9 415 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 INVSQ9Y283 1065 aa7.52□□□□□ -1.2
LDHA-223ENST00000545215 PLIN4Q96Q06 1357 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 GOLGA4Q13439 2230 aaKnown RBP7.52□□□□□ -1.21
LDHA-223ENST00000545215 ADAMTS9Q9P2N4 1935 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 SPTBN1Q01082 2364 aaKnown RBP7.52□□□□□ -1.21
LDHA-223ENST00000545215 MYBPHLA2RUH7 354 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 TSPY2A6NKD2 308 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
LDHA-223ENST00000545215 RGS9O75916 674 aaPredicted RBP7.52□□□□□ -1.21
LDHA-223ENST00000545215 HTR3BO95264 441 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 URODP06132 367 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 HNRNPA1P09651 372 aaKnown RBP eCLIP7.52□□□□□ -1.21
LDHA-223ENST00000545215 ATXN1LP0C7T5 689 aaKnown RBP7.52□□□□□ -1.21
LDHA-223ENST00000545215 HSPD1P10809 573 aaKnown RBP7.52□□□□□ -1.21
LDHA-223ENST00000545215 PSMC3P17980 439 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 DPP6P42658 865 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 GSTM4Q03013 218 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 SQSTM1Q13501 440 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 PPP2R5EQ16537 467 aa7.52□□□□□ -1.21
LDHA-223ENST00000545215 IMMTQ16891 758 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms