RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 NOL4O94818 638 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 FTCDO95954 541 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 OATP04181 439 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 CYBAP13498 195 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 GM2AP17900 193 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 ICAM3P32942 547 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 PTGIRP43119 386 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 GEMIN4P57678 1058 aaKnown RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 MGAT5Q09328 741 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 KCNMA1Q12791 1236 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 ZCWPW2Q504Y3 356 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 DTHD1Q6ZMT9 781 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 PLEKHH3Q7Z736 793 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 PHLDB2Q86SQ0 1253 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 SYCP3Q8IZU3 236 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 PGBD3Q8N328 593 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 FLCNQ8NFG4 579 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 SCG3Q8WXD2 468 aaKnown RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 DGCR14Q96DF8 476 aaKnown RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 UCN2Q96RP3 112 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 GANQ9H2C0 597 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 DENND2DQ9H6A0 471 aaPredicted RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 CYLDQ9NQC7 956 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 TMEM120BA0PK00 339 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 KLRF2D3W0D1 207 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 NDC80O14777 642 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 TTI1O43156 1089 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 EDIL3O43854 480 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 ZBED4O75132 1171 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 PSMG1O95456 288 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 SHBGP04278 402 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 PDHA1P08559 390 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 GLULP15104 373 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 ZNF24P17028 368 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 TAC1P20366 129 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 EIF4BP23588 611 aaKnown RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 CYLC2Q14093 348 aaPredicted RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 CLPPQ16740 277 aaPredicted RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 USP41Q3LFD5 358 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 AGAP9Q5VTM2 703 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 C1orf53Q5VUE5 145 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 DHRS4L2Q6PKH6 230 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 PEX26Q7Z412 305 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 LONP2Q86WA8 852 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 JAMLQ86YT9 394 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 ANKRD35Q8N283 1001 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 SH3KBP1Q96B97 665 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 FAM161BQ96MY7 647 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 TGS1Q96RS0 853 aaKnown RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 SERINC2Q96SA4 455 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 BRD8Q9H0E9 1235 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 MYLK2Q9H1R3 596 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 PORCNQ9H237 461 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 SEMA6BQ9H3T3 888 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 ACAD9Q9H845 621 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 FBXO28Q9NVF7 368 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 EURLQ9NYK6 297 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 BIN2Q9UBW5 565 aaPredicted RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 FETUBQ9UGM5 382 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 TAGLN3Q9UI15 199 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 AMFRQ9UKV5 643 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 ZMYND8Q9ULU4 1186 aaPredicted RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 BARX2Q9UMQ3 279 aaPredicted RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 SMG5Q9UPR3 1016 aaKnown RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 RIPK3Q9Y572 518 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 CYP3A7-CYP3A51PA0A087WV96 503 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 CCDC163A0A0D9SF12 145 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 A0A1B0GVG6 124 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 GTPBP10A4D1E9 387 aaKnown RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 A6NCN8 305 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 DDX3XO00571 662 aaKnown RBP eCLIP5.54□□□□□ -1.52
USP28-213ENST00000544967 MEIS2O14770 477 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 EPHB6O15197 1021 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 FKBP6O75344 327 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 TMEM253P0C7T8 217 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 T-ENOLP0DO92 83 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 VAV1P15498 845 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 CYP3A7P24462 503 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 PDE1BQ01064 536 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 CBX3Q13185 183 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 BTG3Q14201 252 aaPredicted RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 SLC29A2Q14542 456 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 QRICH1Q2TAL8 776 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 TDRD12Q587J7 1177 aaKnown RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 RASIP1Q5U651 963 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 TTBK2Q6IQ55 1244 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 C11orf63Q6NUN7 778 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 PPP4R4Q6NUP7 873 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 VSIG1Q86XK7 387 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 NUP93Q8N1F7 819 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 KIF2BQ8N4N8 673 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.54□□□□□ -1.52
USP28-213ENST00000544967 WDR60Q8WVS4 1066 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 ZFRQ96KR1 1074 aaKnown RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 BTBD9Q96Q07 612 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 MMRN2Q9H8L6 949 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 TYW1Q9NV66 732 aaKnown RBP5.54□□□□□ -1.52
USP28-213ENST00000544967 FAIMQ9NVQ4 179 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 NKIRAS1Q9NYS0 192 aa5.54□□□□□ -1.52
USP28-213ENST00000544967 AMACRQ9UHK6 382 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms