RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 PLEKHA4Q9H4M7 779 aa10.2□□□□□ -0.78
CIT-216ENST00000544872 MMRN2Q9H8L6 949 aa10.2□□□□□ -0.78
CIT-216ENST00000544872 TMEM8AQ9HCN3 771 aa10.2□□□□□ -0.78
CIT-216ENST00000544872 SPATA6Q9NWH7 488 aaPredicted RBP10.2□□□□□ -0.78
CIT-216ENST00000544872 MARCH5Q9NX47 278 aa10.2□□□□□ -0.78
CIT-216ENST00000544872 CA14Q9ULX7 337 aa10.2□□□□□ -0.78
CIT-216ENST00000544872 DUSP12Q9UNI6 340 aa10.2□□□□□ -0.78
CIT-216ENST00000544872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.2□□□□□ -0.78
CIT-216ENST00000544872 SNX9Q9Y5X1 595 aa10.2□□□□□ -0.78
CIT-216ENST00000544872 BACE2Q9Y5Z0 518 aa10.2□□□□□ -0.78
CIT-216ENST00000544872 HECTD1Q9ULT8 2610 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 ANO9A1A5B4 782 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 M0QZQ0 153 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 PRRG1O14668 218 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 FSCN2O14926 492 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 CPB1P15086 417 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 BRCC3P46736 316 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 CASP4P49662 377 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 ARPP19P56211 112 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 YWHAEP62258 255 aaKnown RBP10.19□□□□□ -0.78
CIT-216ENST00000544872 SOX4Q06945 474 aaPredicted RBP10.19□□□□□ -0.78
CIT-216ENST00000544872 PTPN14Q15678 1187 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 MAPRE1Q15691 268 aaKnown RBP10.19□□□□□ -0.78
CIT-216ENST00000544872 DUSP6Q16828 381 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 ZNF699Q32M78 642 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 ZNF528Q3MIS6 628 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 WDR72Q3MJ13 1102 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 ZCWPW2Q504Y3 356 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 ZNF667Q5HYK9 610 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 TPGS2Q68CL5 300 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 SYCE2Q6PIF2 218 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 PRR23CQ6ZRP0 262 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 TMEM173Q86WV6 379 aaPredicted RBP10.19□□□□□ -0.78
CIT-216ENST00000544872 ELMOD1Q8N336 334 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 TOP6BLQ8N6T0 577 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 C1orf127Q8N9H9 656 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 FAM81BQ96LP2 452 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 KLHL5Q96PQ7 755 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 THAP9Q9H5L6 903 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 RXFP1Q9HBX9 757 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 TTC3P53804 2025 aa10.19□□□□□ -0.78
CIT-216ENST00000544872 LRRIQ3A6PVS8 624 aaPredicted RBP10.18□□□□□ -0.78
CIT-216ENST00000544872 HIDE1A8MVS5 230 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 P4HA2O15460 535 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 TEX28O15482 410 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 XYLBO75191 536 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 OAZ2O95190 189 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 CNPP09543 421 aaKnown RBP10.18□□□□□ -0.78
CIT-216ENST00000544872 TKTP29401 623 aaKnown RBP10.18□□□□□ -0.78
CIT-216ENST00000544872 OR1D2P34982 312 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 GCLMP48507 274 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 MXI1P50539 228 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 GUCY2FP51841 1108 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 CLDN10P78369 228 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 ITIH3Q06033 890 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 TAF12Q16514 161 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 NFE2Q16621 373 aaPredicted RBP10.18□□□□□ -0.78
CIT-216ENST00000544872 UVSSAQ2YD98 709 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 ATAT1Q5SQI0 421 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 LMBRD2Q68DH5 695 aaPredicted RBP10.18□□□□□ -0.78
CIT-216ENST00000544872 TTI2Q6NXR4 508 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 CYP26C1Q6V0L0 522 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 SV2AQ7L0J3 742 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 TAS1R1Q7RTX1 841 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 PALB2Q86YC2 1186 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 EFCAB13Q8IY85 973 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 FBXL13Q8NEE6 735 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 OR5B17Q8NGF7 314 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 LNX1Q8TBB1 728 aaPredicted RBP10.18□□□□□ -0.78
CIT-216ENST00000544872 EEF2KMTQ96G04 330 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 FAXDC2Q96IV6 333 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 PIDD1Q9HB75 910 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 SEMA4GQ9NTN9 838 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 ZSCAN32Q9NX65 697 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 GDAP2Q9NXN4 497 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 MTRRQ9UBK8 725 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 CACNG4Q9UBN1 327 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 NXF1Q9UBU9 619 aaKnown RBP10.18□□□□□ -0.78
CIT-216ENST00000544872 SPTA1P02549 2419 aa10.18□□□□□ -0.78
CIT-216ENST00000544872 DSPP15924 2871 aaKnown RBP10.18□□□□□ -0.78
CIT-216ENST00000544872 SMG1Q96Q15 3661 aaKnown RBP10.17□□□□□ -0.78
CIT-216ENST00000544872 KRBA1A5PL33 1030 aa10.17□□□□□ -0.78
CIT-216ENST00000544872 TRIM49BA6NDI0 452 aa10.17□□□□□ -0.78
CIT-216ENST00000544872 GOLGA6L19H0YKK7 550 aa10.17□□□□□ -0.78
CIT-216ENST00000544872 I3L4J1 428 aa10.17□□□□□ -0.78
CIT-216ENST00000544872 B4GALT3O60512 393 aa10.17□□□□□ -0.78
CIT-216ENST00000544872 CLASP2O75122 1294 aaKnown RBP10.17□□□□□ -0.78
CIT-216ENST00000544872 STAU1O95793 577 aaKnown RBP10.17□□□□□ -0.78
CIT-216ENST00000544872 AFPP02771 609 aaKnown RBP10.17□□□□□ -0.78
CIT-216ENST00000544872 C4BPAP04003 597 aaKnown RBP10.17□□□□□ -0.78
CIT-216ENST00000544872 WEE2P0C1S8 567 aa10.17□□□□□ -0.78
CIT-216ENST00000544872 CD44P16070 742 aaKnown RBP10.17□□□□□ -0.78
CIT-216ENST00000544872 GNL1P36915 607 aaPredicted RBP10.17□□□□□ -0.78
CIT-216ENST00000544872 MTHFRP42898 656 aa10.17□□□□□ -0.78
CIT-216ENST00000544872 ALDH1A3P47895 512 aa10.17□□□□□ -0.78
CIT-216ENST00000544872 TUFMP49411 452 aaKnown RBP10.17□□□□□ -0.78
CIT-216ENST00000544872 AARSP49588 968 aaKnown RBP eCLIP10.17□□□□□ -0.78
CIT-216ENST00000544872 MYL5Q02045 173 aa10.17□□□□□ -0.78
CIT-216ENST00000544872 TYRO3Q06418 890 aa10.17□□□□□ -0.78
CIT-216ENST00000544872 PLD1Q13393 1074 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms