RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 DDX23Q9BUQ8 820 aaKnown RBP7.09□□□□□ -1.27
CDCA3-209ENST00000544610 FGFBP2Q9BYJ0 223 aa7.09□□□□□ -1.27
CDCA3-209ENST00000544610 FOXQ1Q9C009 403 aa7.09□□□□□ -1.27
CDCA3-209ENST00000544610 PTPRHQ9HD43 1115 aa7.09□□□□□ -1.27
CDCA3-209ENST00000544610 SAMSN1Q9NSI8 373 aaKnown RBP7.09□□□□□ -1.27
CDCA3-209ENST00000544610 KLK14Q9P0G3 267 aa7.09□□□□□ -1.27
CDCA3-209ENST00000544610 CACNG4Q9UBN1 327 aa7.09□□□□□ -1.27
CDCA3-209ENST00000544610 FBXL5Q9UKA1 691 aa7.09□□□□□ -1.27
CDCA3-209ENST00000544610 CDH7Q9ULB5 785 aa7.09□□□□□ -1.27
CDCA3-209ENST00000544610 MAPK8IP1Q9UQF2 711 aa7.09□□□□□ -1.27
CDCA3-209ENST00000544610 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.09□□□□□ -1.27
CDCA3-209ENST00000544610 ZNF292O60281 2723 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 TDRD15B5MCY1 1934 aaKnown RBP7.08□□□□□ -1.28
CDCA3-209ENST00000544610 KANSL1LA0AUZ9 987 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 TRIM49BA6NDI0 452 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 CASTOR2A6NHX0 329 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 ZNF233A6NK53 670 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 N4BP3O15049 544 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 OGTO15294 1046 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 CLDN3O15551 220 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 EXTL3O43909 919 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 EXOC3O60645 756 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 AKAP3O75969 853 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 ADCY5O95622 1261 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 PRKCBP05771 671 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 C8AP07357 584 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 ADRB2P07550 413 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 MCF2P10911 925 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 ATP1A3P13637 1013 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 KRT13P13646 458 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 ADSSP30520 456 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 COPB1P53618 953 aaKnown RBP7.08□□□□□ -1.28
CDCA3-209ENST00000544610 STX17P56962 302 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 GPC5P78333 572 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 NTHL1P78549 312 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 PRKCQQ04759 706 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 PRPF4BQ13523 1007 aaKnown RBP7.08□□□□□ -1.28
CDCA3-209ENST00000544610 ARID5BQ14865 1188 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 PSMD5Q16401 504 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 ZNF528Q3MIS6 628 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 DCAF4L1Q3SXM0 396 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 VWA3BQ502W6 1294 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 PPM1LQ5SGD2 360 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 FKBP15Q5T1M5 1219 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 FAM171A1Q5VUB5 890 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 SPECC1LQ69YQ0 1117 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 PDXDC1Q6P996 788 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 MPZL3Q6UWV2 235 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 MTSS1LQ765P7 747 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 MAEAQ7L5Y9 396 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 NELFCDQ8IXH7 590 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 FAM186BQ8IYM0 893 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 KIAA2013Q8IYS2 634 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 GPD1LQ8N335 351 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 ST13P5Q8NFI4 369 aaPredicted RBP7.08□□□□□ -1.28
CDCA3-209ENST00000544610 HASPINQ8TF76 798 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 POMGNT1Q8WZA1 660 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 RUBCNQ92622 972 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 FGF13Q92913 245 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 SHDQ96IW2 340 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 ADPGKQ9BRR6 497 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 NUCKS1Q9H1E3 243 aaKnown RBP7.08□□□□□ -1.28
CDCA3-209ENST00000544610 NDST4Q9H3R1 872 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 PDZD7Q9H5P4 517 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 PLEKHA5Q9HAU0 1116 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 PLCB1Q9NQ66 1216 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 HSPBP1Q9NZL4 362 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 PARP2Q9UGN5 583 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 MYO6Q9UM54 1294 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.08□□□□□ -1.28
CDCA3-209ENST00000544610 COL4A3Q01955 1670 aa7.08□□□□□ -1.28
CDCA3-209ENST00000544610 A0A1W2PQJ5 194 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 MED19A0JLT2 244 aaPredicted RBP7.07□□□□□ -1.28
CDCA3-209ENST00000544610 CFAP99D6REC4 459 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 TMEM189-UBE2V1I3L0A0 370 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 ABLIM1O14639 778 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 ADAM12O43184 909 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 FAM189A1O60320 539 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 XYLBO75191 536 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 LRRN2O75325 713 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 RECQL4O94761 1208 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 IL18RAPO95256 599 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 THP07101 528 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 TPM1P09493 284 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 CLTAP09496 248 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 PAX3P23760 479 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 MAGEA9P43362 315 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 MTIF2P46199 727 aaKnown RBP7.07□□□□□ -1.28
CDCA3-209ENST00000544610 PFKPQ01813 784 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 ELAVL2Q12926 359 aaKnown RBP7.07□□□□□ -1.28
CDCA3-209ENST00000544610 BFSP1Q12934 665 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 RAB33AQ14088 237 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 NOLC1Q14978 699 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDCA3-209ENST00000544610 PSMD6Q15008 389 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 MLF2Q15773 248 aaPredicted RBP7.07□□□□□ -1.28
CDCA3-209ENST00000544610 SNRNP35Q16560 246 aaKnown RBP7.07□□□□□ -1.28
CDCA3-209ENST00000544610 CCDC40Q4G0X9 1142 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 MIIPQ5JXC2 388 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 ATF7IP2Q5U623 682 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 SLC39A4Q6P5W5 647 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms