RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 PXNP49023 591 aaPredicted RBP2.9□□□□□ -1.95
YBX3-214ENST00000544501 UCP3P55916 312 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 NXPH1P58417 271 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 ITIH3Q06033 890 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 DPTQ07507 201 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 BOP1Q14137 746 aaKnown RBP2.9□□□□□ -1.95
YBX3-214ENST00000544501 COBLL1Q53SF7 1204 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 LAIR1Q6GTX8 287 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 VWA1Q6PCB0 445 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 LAYNQ6UX15 382 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 Q6YL49 198 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 Q6ZPA2 131 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 MICU3Q86XE3 530 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 VRK3Q8IV63 474 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 CCAR1Q8IX12 1150 aaKnown RBP2.9□□□□□ -1.95
YBX3-214ENST00000544501 FAM109AQ8N4B1 249 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 SLC15A4Q8N697 577 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 DNAJC5GQ8N7S2 189 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 SUPT20HQ8NEM7 779 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 SSH3Q8TE77 659 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 NEU4Q8WWR8 484 aaPredicted RBP2.9□□□□□ -1.95
YBX3-214ENST00000544501 PHKBQ93100 1093 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 PGBD1Q96JS3 809 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 ZC3H10Q96K80 434 aaKnown RBP2.9□□□□□ -1.95
YBX3-214ENST00000544501 Q96MF0 132 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 SLC46A1Q96NT5 459 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 MESP1Q9BRJ9 268 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 PTDSS2Q9BVG9 487 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 UNKQ9C0B0 810 aaKnown RBP2.9□□□□□ -1.95
YBX3-214ENST00000544501 SMOC2Q9H3U7 446 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 TOR3AQ9H497 397 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 ARNT2Q9HBZ2 717 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 CASS4Q9NQ75 786 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 XPNPEP3Q9NQH7 507 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 MRPS18AQ9NVS2 196 aaKnown RBP2.9□□□□□ -1.95
YBX3-214ENST00000544501 ZSCAN32Q9NX65 697 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 KCTD5Q9NXV2 234 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 STK32BQ9NY57 414 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 CPNE7Q9UBL6 633 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 PACSIN3Q9UKS6 424 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 MBD3L4A6NDZ8 208 aaPredicted RBP2.89□□□□□ -1.95
YBX3-214ENST00000544501 MBD3L3A6NE82 208 aaPredicted RBP2.89□□□□□ -1.95
YBX3-214ENST00000544501 DCLK1O15075 740 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 FOXN1O15353 648 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 MPPED1O15442 326 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 PEX1O43933 1283 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 ESRRBO95718 433 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 MAP4K4O95819 1239 aaPredicted RBP2.89□□□□□ -1.95
YBX3-214ENST00000544501 FSHBP01225 129 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 KLRC1P26715 233 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 CD6P30203 668 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 SEC24CP53992 1094 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 INHBCP55103 352 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 MPP3Q13368 585 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 PTPRRQ15256 657 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 NBPF8Q3BBV2 869 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 MGAT5BQ3V5L5 792 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 RBM20Q5T481 1227 aaKnown RBP2.89□□□□□ -1.95
YBX3-214ENST00000544501 ICE2Q659A1 982 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 KIAA0895LQ68EN5 471 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 TMEM108Q6UXF1 575 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 Q6ZNX1 250 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 ZNF627Q7L945 461 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 MRGPRGQ86SM5 289 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 LDLRAD3Q86YD5 345 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 SLC16A11Q8NCK7 471 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 B3GALNT2Q8NCR0 500 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 SLC30A5Q8TAD4 765 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 MAML1Q92585 1016 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 FAM136AQ96C01 138 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 AIFM2Q9BRQ8 373 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 AMBRA1Q9C0C7 1298 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 PCED1AQ9H1Q7 454 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 SACM1LQ9NTJ5 587 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 COL20A1Q9P218 1284 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.89□□□□□ -1.95
YBX3-214ENST00000544501 PCDHGB6Q9Y5F9 930 aa2.89□□□□□ -1.95
YBX3-214ENST00000544501 EPN1Q9Y6I3 576 aaPredicted RBP2.89□□□□□ -1.95
YBX3-214ENST00000544501 CCDC151A5D8V7 595 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 RHPN2P1A8MT19 583 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 PYCARD-AS1I3L0S3 204 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 YY2O15391 372 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 CCP110O43303 1012 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 PQBP1O60828 265 aaKnown RBP2.88□□□□□ -1.95
YBX3-214ENST00000544501 INMTO95050 263 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 IL18RAPO95256 599 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 GCP02774 474 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 NBPF7P0C2Y1 421 aaPredicted RBP2.88□□□□□ -1.95
YBX3-214ENST00000544501 SLC5A1P13866 664 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 PPP3CBP16298 524 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 ZKSCAN1P17029 563 aaPredicted RBP2.88□□□□□ -1.95
YBX3-214ENST00000544501 KRT4P19013 534 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 CHRM3P20309 590 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 MPLP40238 635 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 FOLR3P41439 243 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 ZNF134P52741 427 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 TGFB2P61812 414 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 KLF10Q13118 480 aa2.88□□□□□ -1.95
YBX3-214ENST00000544501 IFIT5Q13325 482 aaKnown RBP2.88□□□□□ -1.95
YBX3-214ENST00000544501 PICALMQ13492 652 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms