RNA–Protein interactions for RNA: ENST00000543938.5

AP3B2-210, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 2,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-210ENST00000543938 RANBP9Q96S59 729 aa13.26□□□□□ -0.29
AP3B2-210ENST00000543938 TDRD1Q9BXT4 1180 aaKnown RBP13.26□□□□□ -0.29
AP3B2-210ENST00000543938 HOXD1Q9GZZ0 328 aa13.26□□□□□ -0.29
AP3B2-210ENST00000543938 SLITRK6Q9H5Y7 841 aa13.26□□□□□ -0.29
AP3B2-210ENST00000543938 RWDD2AQ9UIY3 292 aa13.26□□□□□ -0.29
AP3B2-210ENST00000543938 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 CCDC188H7C350 402 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 RASGRF2O14827 1237 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 PRLP01236 227 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 IL13P35225 146 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
AP3B2-210ENST00000543938 POLR2GP62487 172 aaKnown RBP eCLIP13.25□□□□□ -0.29
AP3B2-210ENST00000543938 SLC29A2Q14542 456 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 PPP2R5EQ16537 467 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 ADAMTSL2Q86TH1 951 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 TERB1Q8NA31 727 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 TTLQ8NG68 377 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 RASSF5Q8WWW0 418 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 SMARCAD1Q9H4L7 1026 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 STMN3Q9NZ72 180 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 CEP72Q9P209 647 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 CTNND2Q9UQB3 1225 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 POLHQ9Y253 713 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 EMSYQ7Z589 1322 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 MEGF6O75095 1541 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.25□□□□□ -0.29
AP3B2-210ENST00000543938 FAM172BPA6NC97 362 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 MAGEC1O60732 1142 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 FKBP6O75344 327 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 MYO1DO94832 1006 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 C6orf222P0C671 652 aaPredicted RBP13.25□□□□□ -0.29
AP3B2-210ENST00000543938 HNRNPH3P31942 346 aaKnown RBP13.25□□□□□ -0.29
AP3B2-210ENST00000543938 BLVRAP53004 296 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 PEX3P56589 373 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 SP140Q13342 867 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 MAPRE2Q15555 327 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 TRIM16LQ309B1 348 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 TRMT5Q32P41 509 aaKnown RBP13.25□□□□□ -0.29
AP3B2-210ENST00000543938 CLVS2Q5SYC1 327 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 PPP4R4Q6NUP7 873 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 RNF19BQ6ZMZ0 732 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 LPCAT2Q7L5N7 544 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 CLNKQ7Z7G1 428 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 EPS8L3Q8TE67 593 aaKnown RBP13.25□□□□□ -0.29
AP3B2-210ENST00000543938 RAPGEF4Q8WZA2 1011 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 CRAMP1Q96RY5 1269 aa13.25□□□□□ -0.29
AP3B2-210ENST00000543938 DBR1Q9UK59 544 aaKnown RBP13.25□□□□□ -0.29
AP3B2-210ENST00000543938 A8MU76 341 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 CCRL2O00421 344 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 YKT6O15498 198 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 RARBP10826 455 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 PKLRP30613 574 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 TSPAN7P41732 249 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 MAGEA1P43355 309 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 ARHGAP4P98171 946 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 KLHL30Q0D2K2 578 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 OXA1LQ15070 435 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 EPHA10Q5JZY3 1008 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 TRAPPC3LQ5T215 181 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 AGAP7PQ5VUJ5 663 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 SLX4IPQ5VYV7 408 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 AAGABQ6PD74 315 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 TMC5Q6UXY8 1006 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 NLRX1Q86UT6 975 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 KSR1Q8IVT5 923 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
AP3B2-210ENST00000543938 C10orf82Q8WW14 230 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 TTC9Q92623 222 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 ROPN1BQ9BZX4 212 aaPredicted RBP13.24□□□□□ -0.29
AP3B2-210ENST00000543938 ROPN1Q9HAT0 212 aaPredicted RBP13.24□□□□□ -0.29
AP3B2-210ENST00000543938 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.24□□□□□ -0.29
AP3B2-210ENST00000543938 CDH7Q9ULB5 785 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 ARHGEF35A5YM69 484 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 HDAC3O15379 428 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 HOXC11O43248 304 aaPredicted RBP13.24□□□□□ -0.29
AP3B2-210ENST00000543938 RANBP6O60518 1105 aaKnown RBP13.24□□□□□ -0.29
AP3B2-210ENST00000543938 SPAG7O75391 227 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 TATP17735 454 aaPredicted RBP13.24□□□□□ -0.29
AP3B2-210ENST00000543938 IREB2P48200 963 aaKnown RBP13.24□□□□□ -0.29
AP3B2-210ENST00000543938 NR2C2P49116 596 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 CASP5P51878 434 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 ACTR3P61158 418 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 EXOSC10Q01780 885 aaKnown RBP13.24□□□□□ -0.29
AP3B2-210ENST00000543938 HP1BP3Q5SSJ5 553 aaPredicted RBP13.24□□□□□ -0.29
AP3B2-210ENST00000543938 ITPRIPL1Q6GPH6 555 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 OR10Z1Q8NGY1 313 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 UBA2Q9UBT2 640 aaPredicted RBP13.24□□□□□ -0.29
AP3B2-210ENST00000543938 PPM1HQ9ULR3 514 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 NEU2Q9Y3R4 380 aa13.24□□□□□ -0.29
AP3B2-210ENST00000543938 TXNDC9O14530 226 aa13.23□□□□□ -0.29
AP3B2-210ENST00000543938 USP1O94782 785 aa13.23□□□□□ -0.29
AP3B2-210ENST00000543938 OR5F1O95221 314 aa13.23□□□□□ -0.29
AP3B2-210ENST00000543938 CAPN1P07384 714 aa13.23□□□□□ -0.29
AP3B2-210ENST00000543938 NR4A1P22736 598 aa13.23□□□□□ -0.29
AP3B2-210ENST00000543938 NUDT1P36639 197 aa13.23□□□□□ -0.29
AP3B2-210ENST00000543938 BMPR1AP36894 532 aa13.23□□□□□ -0.29
AP3B2-210ENST00000543938 BTDP43251 543 aa13.23□□□□□ -0.29
AP3B2-210ENST00000543938 GPD2P43304 727 aa13.23□□□□□ -0.29
AP3B2-210ENST00000543938 LRRC63Q05C16 580 aa13.23□□□□□ -0.29
AP3B2-210ENST00000543938 DPYDQ12882 1025 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms