RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 IRAK4Q9NWZ3 460 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 RNF181Q9P0P0 153 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 ARMCX1Q9P291 453 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 MT-CO1P00395 513 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 LMNAP02545 664 aaKnown RBP13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 PGK2P07205 417 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 OSBPP22059 807 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 RRP1BQ14684 758 aaKnown RBP13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 GLRA4Q5JXX5 417 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 RCOR2Q8IZ40 523 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 CAVIN3Q969G5 261 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 FSD1LQ9BXM9 530 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 UPF3AQ9H1J1 476 aaKnown RBP13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 MANSC1Q9H8J5 431 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 TMEM8AQ9HCN3 771 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 LRP5O75197 1615 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 DLG4P78352 724 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 ANO4Q32M45 955 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 STYK1Q6J9G0 422 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 SLC30A9Q6PML9 568 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 NT5DC3Q86UY8 548 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 FEZF2Q8TBJ5 459 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 SALL4Q9UJQ4 1053 aa13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 SMG5Q9UPR3 1016 aaKnown RBP13.54□□□□□ -0.24
TUBGCP2-210ENST00000543663 TBX3O15119 743 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 RFX1P22670 979 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 ACAD10Q6JQN1 1059 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 RNF139Q8WU17 664 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 FAM193BQ96PV7 902 aaPredicted RBP13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 TBX20Q9UMR3 447 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 TRIM33Q9UPN9 1127 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 TAF1P21675 1872 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 FANCGO15287 622 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 SETSIPP0DME0 302 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 VCAM1P19320 739 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 SLC1A1P43005 524 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 CDK17Q00537 523 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 TKFCQ3LXA3 575 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 SUPT20HL1Q3ZLR7 823 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 ARSHQ5FYA8 562 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 LRRC55Q6ZSA7 311 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 ENOSF1Q7L5Y1 443 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 APTXQ7Z2E3 356 aaKnown RBP13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 FBXO36Q8NEA4 188 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 LRRN4Q8WUT4 740 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 VPS39Q96JC1 886 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 CYP26B1Q9NR63 512 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 NPTX2P47972 431 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 AMPD2Q01433 879 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 DEUP1Q05D60 604 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 CNGA3Q16281 694 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 ATP13A4Q4VNC1 1196 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 LLGL2Q6P1M3 1020 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 ARMCX2Q7L311 632 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 FUKQ8N0W3 1084 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 RNF148Q8N7C7 305 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 MTMR12Q9C0I1 747 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 HUS1O60921 280 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 ATP9AO75110 1047 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 MED21Q13503 144 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 ACAD11Q709F0 780 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 OTOP1Q7RTM1 612 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 AGGF1Q8N302 714 aaeCLIP13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 ACTL9Q8TC94 416 aa13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 DACT3Q96B18 629 aaPredicted RBP13.53□□□□□ -0.24
TUBGCP2-210ENST00000543663 UPP2O95045 317 aa13.52□□□□□ -0.24
TUBGCP2-210ENST00000543663 PLIN5Q00G26 463 aa13.52□□□□□ -0.24
TUBGCP2-210ENST00000543663 EMC2Q15006 297 aa13.52□□□□□ -0.24
TUBGCP2-210ENST00000543663 SURF1Q15526 300 aa13.52□□□□□ -0.24
TUBGCP2-210ENST00000543663 FAM182AQ5T1J6 154 aa13.52□□□□□ -0.24
TUBGCP2-210ENST00000543663 LRRC8EQ6NSJ5 796 aa13.52□□□□□ -0.24
TUBGCP2-210ENST00000543663 NUP93Q8N1F7 819 aa13.52□□□□□ -0.24
TUBGCP2-210ENST00000543663 AIPL1Q9NZN9 384 aa13.52□□□□□ -0.24
TUBGCP2-210ENST00000543663 CPSF3Q9UKF6 684 aaKnown RBP13.52□□□□□ -0.24
TUBGCP2-210ENST00000543663 UBA6A0AVT1 1052 aaPredicted RBP13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 XPO1O14980 1071 aaKnown RBP13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 WDR46O15213 610 aaKnown RBP13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 MYL2P10916 166 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 PTENP60484 403 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 OTUD4Q01804 1114 aaKnown RBP13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 CNTN2Q02246 1040 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 XKR3Q5GH77 459 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 TRIM72Q6ZMU5 477 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 RAB44Q7Z6P3 723 aaPredicted RBP13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 ZNF280CQ8ND82 737 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 SNRNP27Q8WVK2 155 aaKnown RBP13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 RUBCNQ92622 972 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 SPON2Q9BUD6 331 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 ACAD9Q9H845 621 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 ARHGAP26Q9UNA1 814 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 GOLGA8QA0A0J9YX86 632 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 GOLGA8OA6NCC3 632 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 GOLGA8NF8WBI6 632 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 APOL1O14791 398 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 XPOTO43592 962 aaKnown RBP13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 KCNJ2P63252 427 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 PCNX4Q63HM2 1172 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 ANGPTL8Q6UXH0 198 aa13.52□□□□□ -0.25
TUBGCP2-210ENST00000543663 POU5F2Q8N7G0 328 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms