RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ARID3AQ99856 593 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 RTP3Q9BQQ7 232 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 NT5C1AQ9BXI3 368 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 BCO2Q9BYV7 579 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 SDCBP2Q9H190 292 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 DPEP3Q9H4B8 488 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 UBE2ZQ9H832 354 aaPredicted RBP6.73□□□□□ -1.33
LTBR-212ENST00000543542 SFXN1Q9H9B4 322 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 CISHQ9NSE2 258 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 APEX2Q9UBZ4 518 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 AFF4Q9UHB7 1163 aaKnown RBP6.73□□□□□ -1.33
LTBR-212ENST00000543542 CD207Q9UJ71 328 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 FBXW11Q9UKB1 542 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 DNAJC12Q9UKB3 198 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 COG5Q9UP83 839 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 SLC27A5Q9Y2P5 690 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 MYO9BQ13459 2157 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 MTCL1Q9Y4B5 1905 aaKnown RBP6.73□□□□□ -1.33
LTBR-212ENST00000543542 REV3LO60673 3130 aa6.73□□□□□ -1.33
LTBR-212ENST00000543542 CCDC195A0A1B0GUA6 201 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 MYBPHLA2RUH7 354 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 GABRDO14764 452 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 CCL16O15467 120 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 TBC1D4O60343 1298 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 CILPO75339 1184 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 ZMYND10O75800 440 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 ABLIM3O94929 683 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 GLP2RO95838 553 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 C1RP00736 705 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 HOXB8P17481 243 aaPredicted RBP6.72□□□□□ -1.33
LTBR-212ENST00000543542 BDNFP23560 247 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 ADORA2BP29275 332 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 GRIK1P39086 918 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 TUFMP49411 452 aaKnown RBP6.72□□□□□ -1.33
LTBR-212ENST00000543542 EPHB3P54753 998 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 SLC8A3P57103 927 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 RPL10AP62906 217 aaKnown RBP6.72□□□□□ -1.33
LTBR-212ENST00000543542 GCNT1Q02742 428 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 TWF1Q12792 350 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 SYCP1Q15431 976 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 AAK1Q2M2I8 961 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 UVSSAQ2YD98 709 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 IQCEQ6IPM2 695 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 PHLDB3Q6NSJ2 640 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 GJB7Q6PEY0 223 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 CACNA2D4Q7Z3S7 1137 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 LIMS2Q7Z4I7 341 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 LRRTM3Q86VH5 581 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 ATAD1Q8NBU5 361 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 RBBP8NLQ8NC74 664 aaPredicted RBP6.72□□□□□ -1.33
LTBR-212ENST00000543542 VN1R2Q8NFZ6 395 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 LMO3Q8TAP4 145 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 MYCBPAPQ8TBZ2 947 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 HDAC7Q8WUI4 952 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 SMG7Q92540 1137 aaKnown RBP6.72□□□□□ -1.33
LTBR-212ENST00000543542 KAT5Q92993 513 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 MYLPFQ96A32 169 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 TMEM176AQ96HP8 235 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 ZNF512Q96ME7 567 aaPredicted RBP6.72□□□□□ -1.33
LTBR-212ENST00000543542 SPAG5Q96R06 1193 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 LPIN3Q9BQK8 851 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 PDCL3Q9H2J4 239 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 FAM207AQ9NSI2 230 aaPredicted RBP6.72□□□□□ -1.33
LTBR-212ENST00000543542 FAM49BQ9NUQ9 324 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 TMLHEQ9NVH6 421 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 ZDHHC7Q9NXF8 308 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 IFNKQ9P0W0 207 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 THEGQ9P2T0 379 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 HESX1Q9UBX0 185 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 HMGXB4Q9UGU5 601 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 MAFFQ9ULX9 164 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 FAM50BQ9Y247 325 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 INSL5Q9Y5Q6 135 aa6.72□□□□□ -1.33
LTBR-212ENST00000543542 MYH10P35580 1976 aa6.71□□□□□ -1.33
LTBR-212ENST00000543542 SZT2Q5T011 3432 aa6.71□□□□□ -1.33
LTBR-212ENST00000543542 CLDN5O00501 218 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 TRIM66O15016 1216 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 TEX33O43247 280 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 MED7O43513 233 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 TBX10O75333 385 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 RFPL2O75678 378 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 AP1G2O75843 785 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 SOAT2O75908 522 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 SEC24AO95486 1093 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 HNRNPA1P09651 372 aaKnown RBP eCLIP6.71□□□□□ -1.34
LTBR-212ENST00000543542 FAM200BP0CF97 657 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 HAPLN1P10915 354 aaPredicted RBP6.71□□□□□ -1.34
LTBR-212ENST00000543542 VDRP11473 427 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 CCDC130P13994 396 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 RFX1P22670 979 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 CYP2F1P24903 491 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 MTHFRP42898 656 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 KLK7P49862 253 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 POLR2FP61218 127 aaKnown RBP6.71□□□□□ -1.34
LTBR-212ENST00000543542 APBA1Q02410 837 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 ITIH3Q06033 890 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 DLX2Q07687 328 aaPredicted RBP6.71□□□□□ -1.34
LTBR-212ENST00000543542 INCA1Q0VD86 236 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 KCNMA1Q12791 1236 aa6.71□□□□□ -1.34
LTBR-212ENST00000543542 IFRD2Q12894 506 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms