RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 F5H5T6 163 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 RASA4O43374 803 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 NCK2O43639 380 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 APRTP07741 180 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 PRKAR2AP13861 404 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 NCF2P19878 526 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 MAP4P27816 1152 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 TAGLNQ01995 201 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 KIF19Q2TAC6 998 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 HABP4Q5JVS0 413 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 OVOS1Q6IE37 1185 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 TBC1D1Q86TI0 1168 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 ZNF410Q86VK4 478 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 VGLL2Q8N8G2 317 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 WNK4Q96J92 1243 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 CBWD1Q9BRT8 395 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 EMILIN2Q9BXX0 1053 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 GTSE1Q9NYZ3 720 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 BAIAP2L1Q9UHR4 511 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 MSRAQ9UJ68 235 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 DBR1Q9UK59 544 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 M0QYT0 321 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 TBC1D12O60347 775 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 BAG2O95816 211 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 PGK1P00558 417 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 GUCY2CP25092 1073 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 TYK2P29597 1187 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 LBRQ14739 615 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 SMAD1Q15797 465 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 RABGAP1LQ5R372 815 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 GJC2Q5T442 439 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 IZUMO3Q5VZ72 239 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 GPR142Q7Z601 462 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 RASSF3Q86WH2 238 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 CRLF3Q8IUI8 442 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 FAM9CQ8IZT9 166 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 CCDC197Q8NCU1 140 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 PPWD1Q96BP3 646 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 CYFIP2Q96F07 1278 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 CGRRF1Q99675 332 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 WDCPQ9H6R7 721 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 RSAD1Q9HA92 442 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 LATS2Q9NRM7 1088 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 PCDHGB7Q9Y5F8 929 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 A0A1B0GTH6 734 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 FAM187AA6NFU0 413 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 MTSS1O43312 755 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 RNASEH1O60930 286 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 F9P00740 461 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 LGALS2P05162 132 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 MCF2P10911 925 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 MYL4P12829 197 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 AXLP30530 894 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 RARRES1P49788 294 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 BCAT1P54687 386 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 GRIN1Q05586 938 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 POLD3Q15054 466 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 EPC2Q52LR7 807 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 CCDC157Q569K6 752 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 MFN1Q8IWA4 741 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 REM2Q8IYK8 340 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 NKX2-3Q8TAU0 364 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 SLC35G2Q8TBE7 412 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 TRAPPC12Q8WVT3 735 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 MAML1Q92585 1016 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 KRT35Q92764 455 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 SNF8Q96H20 258 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 TAF1DQ9H5J8 278 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 METTL5Q9NRN9 209 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 SNTG2Q9NY99 539 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 RBM47A0AV96 593 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 GRID2IPA4D2P6 1211 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 BPNT1O95861 308 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 CXCL8P10145 99 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 ART3Q13508 389 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 ALS2CLQ60I27 953 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 RNF135Q8IUD6 432 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 NLGN2Q8NFZ4 835 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 GPR63Q9BZJ6 419 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 CD248Q9HCU0 757 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 PRR23AA6NEV1 266 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 NDUFS3O75489 264 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 MYO1DO94832 1006 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 HADHAP40939 763 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 GIT2Q14161 759 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 PCSK7Q16549 785 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 BOLA3Q53S33 107 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 FAM171A1Q5VUB5 890 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 ADCK2Q7Z695 626 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 WDR49Q8IV35 697 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 SDR16C5Q8N3Y7 309 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 CYP2W1Q8TAV3 490 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 DDI1Q8WTU0 396 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 RANBP17Q9H2T7 1088 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 RAB6BQ9NRW1 208 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 A0A087WUV0 522 aaPredicted RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 DDHD2O94830 711 aa7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 ASS1P00966 412 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-206ENST00000543397 ETFBP38117 255 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms