RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 NOD2Q9HC29 1040 aa11.21□□□□□ -0.62
CALU-206ENST00000542996 ACSS2Q9NR19 701 aa11.21□□□□□ -0.62
CALU-206ENST00000542996 MTF2Q9Y483 593 aaPredicted RBP11.21□□□□□ -0.62
CALU-206ENST00000542996 NPTXRO95502 500 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 PIGRP01833 764 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 HARSP12081 509 aaKnown RBP11.2□□□□□ -0.62
CALU-206ENST00000542996 GNAZP19086 355 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 ADRA1DP25100 572 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 BRDTQ58F21 947 aaPredicted RBP11.2□□□□□ -0.62
CALU-206ENST00000542996 OTOAQ7RTW8 1153 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 PARP9Q8IXQ6 854 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 EBF2Q9HAK2 575 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 CISHQ9NSE2 258 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 ANKEF1Q9NU02 776 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 ETNK2Q9NVF9 386 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 WHRNQ9P202 907 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 CPSF3Q9UKF6 684 aaKnown RBP11.2□□□□□ -0.62
CALU-206ENST00000542996 PATJQ8NI35 1801 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 IGKV6-21A0A0C4DH24 114 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 SPOPO43791 374 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 TCEA3O75764 348 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 SUPT20HL2P0C7V6 817 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 NFX1Q12986 1120 aaKnown RBP11.2□□□□□ -0.62
CALU-206ENST00000542996 SUPT20HL1Q3ZLR7 823 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 MARCH8Q5T0T0 291 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 OTUD1Q5VV17 481 aaPredicted RBP11.2□□□□□ -0.62
CALU-206ENST00000542996 ARHGEF16Q5VV41 709 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 DSTYKQ6XUX3 929 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 RELL1Q8IUW5 271 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 SLC4A11Q8NBS3 891 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 WRNIP1Q96S55 665 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 MTMR10Q9NXD2 777 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 MAVSQ7Z434 540 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 FAM160B2Q86V87 743 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 KATNAL2Q8IYT4 538 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 TCP11Q8WWU5 503 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 LRRC45Q96CN5 670 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 CWC15Q9P013 229 aaKnown RBP11.2□□□□□ -0.62
CALU-206ENST00000542996 AGO2Q9UKV8 859 aaKnown RBP11.2□□□□□ -0.62
CALU-206ENST00000542996 FNDC1Q4ZHG4 1894 aaPredicted RBP11.2□□□□□ -0.62
CALU-206ENST00000542996 TRMT10BQ6PF06 316 aaKnown RBP11.2□□□□□ -0.62
CALU-206ENST00000542996 CAND1Q86VP6 1230 aaKnown RBP11.2□□□□□ -0.62
CALU-206ENST00000542996 CCDC26Q8TAB7 109 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 WDR60Q8WVS4 1066 aa11.2□□□□□ -0.62
CALU-206ENST00000542996 RBM15Q96T37 977 aaKnown RBP eCLIP11.2□□□□□ -0.621e-8■■■□□ 18.5
CALU-206ENST00000542996 TLR3O15455 904 aaKnown RBP11.19□□□□□ -0.62
CALU-206ENST00000542996 EXTL3O43909 919 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 GRAP2O75791 330 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 CCNB1P14635 433 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 TARSP26639 723 aaKnown RBP11.19□□□□□ -0.62
CALU-206ENST00000542996 RPL22P35268 128 aaKnown RBP11.19□□□□□ -0.62
CALU-206ENST00000542996 DYNLT1P63172 113 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 ZC3H12AQ5D1E8 599 aaKnown RBP11.19□□□□□ -0.62
CALU-206ENST00000542996 IZUMO3Q5VZ72 239 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 DENND2CQ68D51 928 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 TREML1Q86YW5 311 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 CABS1Q96KC9 395 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 RBAKQ9NYW8 714 aaPredicted RBP11.19□□□□□ -0.62
CALU-206ENST00000542996 SLC9A2Q9UBY0 812 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 PCDHB2Q9Y5E7 798 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 MRPL42Q9Y6G3 142 aaKnown RBP11.19□□□□□ -0.62
CALU-206ENST00000542996 COL4A4P53420 1690 aaPredicted RBP11.19□□□□□ -0.62
CALU-206ENST00000542996 NYNRINQ9P2P1 1898 aaKnown RBP11.19□□□□□ -0.62
CALU-206ENST00000542996 CXCL8P10145 99 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 BRAFP15056 766 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 GNA15P30679 374 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 SPDYCQ5MJ68 293 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 NUGGCQ68CJ6 796 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 KCNN1Q92952 543 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 ACO2Q99798 780 aaKnown RBP11.19□□□□□ -0.62
CALU-206ENST00000542996 INTS9Q9NV88 658 aaKnown RBP11.19□□□□□ -0.62
CALU-206ENST00000542996 ENTPD5O75356 428 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 ENDOD1O94919 500 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 VGLL4Q14135 290 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 FAXCQ5TGI0 409 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 LRRC6Q86X45 466 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 XYLT1Q86Y38 959 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 AGBL3Q8NEM8 1001 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 AVENQ9NQS1 362 aaPredicted RBP11.19□□□□□ -0.62
CALU-206ENST00000542996 TBC1D22BQ9NU19 505 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 UVRAGQ9P2Y5 699 aa11.19□□□□□ -0.62
CALU-206ENST00000542996 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.18□□□□□ -0.62
CALU-206ENST00000542996 RGS16O15492 202 aaPredicted RBP11.18□□□□□ -0.62
CALU-206ENST00000542996 PEX11AO75192 247 aa11.18□□□□□ -0.62
CALU-206ENST00000542996 AGTP01019 485 aa11.18□□□□□ -0.62
CALU-206ENST00000542996 MAGEA4P43358 317 aa11.18□□□□□ -0.62
CALU-206ENST00000542996 GPAT2Q6NUI2 795 aa11.18□□□□□ -0.62
CALU-206ENST00000542996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.18□□□□□ -0.623e-36■■■□□ 17.1
CALU-206ENST00000542996 OXCT2Q9BYC2 517 aaPredicted RBP11.18□□□□□ -0.62
CALU-206ENST00000542996 GPATCH2LQ9NWQ4 482 aa11.18□□□□□ -0.62
CALU-206ENST00000542996 HAO1Q9UJM8 370 aa11.18□□□□□ -0.62
CALU-206ENST00000542996 MIF4GDA9UHW6 222 aaKnown RBP11.18□□□□□ -0.62
CALU-206ENST00000542996 IRF6O14896 467 aa11.18□□□□□ -0.62
CALU-206ENST00000542996 ECEL1O95672 775 aa11.18□□□□□ -0.62
CALU-206ENST00000542996 CCDC62Q6P9F0 684 aa11.18□□□□□ -0.62
CALU-206ENST00000542996 ZCCHC9Q8N567 271 aaKnown RBP11.18□□□□□ -0.62
CALU-206ENST00000542996 SH3RF2Q8TEC5 729 aa11.18□□□□□ -0.62
CALU-206ENST00000542996 NIFKQ9BYG3 293 aaKnown RBP11.18□□□□□ -0.62
CALU-206ENST00000542996 ADM5C9JUS6 153 aa11.18□□□□□ -0.62
CALU-206ENST00000542996 RPSAP08865 295 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms