RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CCDC78A2IDD5 438 aa13.66□□□□□ -0.22
TNC-212ENST00000542877 SUPT3HB4E1H0 165 aa13.66□□□□□ -0.22
TNC-212ENST00000542877 CYP2C8P10632 490 aa13.66□□□□□ -0.22
TNC-212ENST00000542877 PMS1P54277 932 aaKnown RBP13.66□□□□□ -0.22
TNC-212ENST00000542877 RUNX1T1Q06455 604 aa13.66□□□□□ -0.22
TNC-212ENST00000542877 CRYMQ14894 314 aa13.66□□□□□ -0.22
TNC-212ENST00000542877 RCN1Q15293 331 aa13.66□□□□□ -0.22
TNC-212ENST00000542877 TTI2Q6NXR4 508 aa13.66□□□□□ -0.22
TNC-212ENST00000542877 ZBED2Q9BTP6 218 aa13.66□□□□□ -0.22
TNC-212ENST00000542877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.66□□□□□ -0.22
TNC-212ENST00000542877 PCDHB8Q9UN66 801 aa13.66□□□□□ -0.22
TNC-212ENST00000542877 MYO1GB0I1T2 1018 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 MUTP22033 750 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 CACNB2Q08289 660 aaPredicted RBP13.65□□□□□ -0.22
TNC-212ENST00000542877 CUL2Q13617 745 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 MTFR1Q15390 333 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 ADRM1Q16186 407 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 PABPC5Q96DU9 382 aaKnown RBP13.65□□□□□ -0.22
TNC-212ENST00000542877 RBBP8Q99708 897 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 IL1RAPL1Q9NZN1 696 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 CD274Q9NZQ7 290 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 DCDC2Q9UHG0 476 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 TBX20Q9UMR3 447 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 A0A0G2JLW4 131 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 SYNDIG1LA6NDD5 238 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 CLASP2O75122 1294 aaKnown RBP13.65□□□□□ -0.22
TNC-212ENST00000542877 PDGFRBP09619 1106 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 RGS4P49798 205 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 HERVK_113P62684 666 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 SV2CQ496J9 727 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 OLFML2BQ68BL8 750 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 OR6J1Q8NGC5 347 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 WNK4Q96J92 1243 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 CNDP1Q96KN2 507 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 PI4K2AQ9BTU6 479 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 KBTBD4Q9NVX7 518 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 INO80Q9ULG1 1556 aaPredicted RBP13.65□□□□□ -0.22
TNC-212ENST00000542877 FKBP9O95302 570 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 GZMAP12544 262 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
TNC-212ENST00000542877 PLOD1Q02809 727 aaPredicted RBP13.65□□□□□ -0.22
TNC-212ENST00000542877 EPC2Q52LR7 807 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 CDKAL1Q5VV42 579 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 MOXD1Q6UVY6 613 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 FKBP9P1Q75LS8 142 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 TMEM161AQ9NX61 479 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 SLC39A10Q9ULF5 831 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 ADGRB3O60242 1522 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 SETD1BQ9UPS6 1966 aaKnown RBP13.65□□□□□ -0.22
TNC-212ENST00000542877 FOXN3O00409 490 aaPredicted RBP13.65□□□□□ -0.22
TNC-212ENST00000542877 XPO1O14980 1071 aaKnown RBP13.65□□□□□ -0.22
TNC-212ENST00000542877 CAMTA2O94983 1202 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 TJAP1Q5JTD0 557 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 DUSP10Q9Y6W6 482 aa13.65□□□□□ -0.22
TNC-212ENST00000542877 DGKIO75912 1065 aa13.65□□□□□ -0.23
TNC-212ENST00000542877 THRAP10827 490 aa13.65□□□□□ -0.23
TNC-212ENST00000542877 BRD2P25440 801 aaKnown RBP13.65□□□□□ -0.23
TNC-212ENST00000542877 FAM83EQ2M2I3 478 aa13.65□□□□□ -0.23
TNC-212ENST00000542877 GOLGA7BQ2TAP0 167 aa13.65□□□□□ -0.23
TNC-212ENST00000542877 TFB1MQ8WVM0 346 aaKnown RBP13.65□□□□□ -0.23
TNC-212ENST00000542877 HIC2Q96JB3 615 aa13.65□□□□□ -0.23
TNC-212ENST00000542877 FOPNLQ96NB1 174 aa13.65□□□□□ -0.23
TNC-212ENST00000542877 KCNH7Q9NS40 1196 aa13.65□□□□□ -0.23
TNC-212ENST00000542877 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.65□□□□□ -0.23
TNC-212ENST00000542877 SLC38A7Q9NVC3 462 aa13.65□□□□□ -0.23
TNC-212ENST00000542877 PKP3Q9Y446 797 aa13.65□□□□□ -0.23
TNC-212ENST00000542877 SPDYE5A6NIY4 337 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 GOLGA8TH3BQL2 631 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 SPDYE7PQ495Y7 208 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 TTC33Q6PID6 262 aaPredicted RBP13.64□□□□□ -0.23
TNC-212ENST00000542877 FAR2Q96K12 515 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 DCLRE1BQ9H816 532 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 LATS2Q9NRM7 1088 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 FAM49BQ9NUQ9 324 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 ZC3H4Q9UPT8 1303 aaKnown RBP13.64□□□□□ -0.23
TNC-212ENST00000542877 ALBP02768 609 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 NUDT2P50583 147 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 OVGP1Q12889 678 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 C1orf131Q8NDD1 294 aaKnown RBP13.64□□□□□ -0.23
TNC-212ENST00000542877 IPMKQ8NFU5 416 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 SLC7A14Q8TBB6 771 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 INPP5DQ92835 1189 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 HAO1Q9UJM8 370 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 ZC3H11AO75152 810 aaKnown RBP eCLIP13.64□□□□□ -0.23
TNC-212ENST00000542877 VCAM1P19320 739 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 SKOR1P84550 965 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 MEI1Q5TIA1 1274 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 MFSD14CQ5VZR4 134 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 TBC1D19Q8N5T2 526 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 C17orf80Q9BSJ5 609 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 GPR75-ASB3A0A0A6YYF3 556 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 MSH4O15457 936 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 SLC37A4O43826 429 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 CLK1P49759 484 aaKnown RBP13.64□□□□□ -0.23
TNC-212ENST00000542877 TRIM60Q495X7 471 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 ZCWPW2Q504Y3 356 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 DCAF6Q58WW2 860 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 PKN3Q6P5Z2 889 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 B4GALNT2Q8NHY0 566 aa13.64□□□□□ -0.23
TNC-212ENST00000542877 UBA3Q8TBC4 463 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms