RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 ADGRD1Q6QNK2 874 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 APBB1IPQ7Z5R6 666 aaPredicted RBP13.59□□□□□ -0.23
DDX11-223ENST00000542838 PCGF5Q86SE9 256 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 RHPN2Q8IUC4 686 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 MCPH1Q8NEM0 835 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 ZNF606Q8WXB4 792 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 NKD2Q969F2 451 aaPredicted RBP13.59□□□□□ -0.23
DDX11-223ENST00000542838 TMEM39BQ9GZU3 492 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 POLR3FQ9H1D9 316 aaPredicted RBP13.59□□□□□ -0.23
DDX11-223ENST00000542838 C10orf88Q9H8K7 445 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 XPNPEP1Q9NQW7 623 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 SPATS2LQ9NUQ6 558 aaKnown RBP13.59□□□□□ -0.23
DDX11-223ENST00000542838 ARL8BQ9NVJ2 186 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 HEY2Q9UBP5 337 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 NUB1Q9Y5A7 615 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 DGAT1O75907 488 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 DYNLT1P63172 113 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 OGDHQ02218 1023 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 GHRHRQ02643 423 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 MSS51Q4VC12 460 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 ANKRD22Q5VYY1 191 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 TAB3Q8N5C8 712 aaPredicted RBP13.59□□□□□ -0.23
DDX11-223ENST00000542838 BTBD10Q9BSF8 475 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 TRIM55Q9BYV6 548 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 PXMP2Q9NR77 195 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 ARHGAP28Q9P2N2 729 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 STOML1Q9UBI4 398 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 SEPT9Q9UHD8 586 aaPredicted RBP13.59□□□□□ -0.23
DDX11-223ENST00000542838 CNTNAP1P78357 1384 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 LTBP4Q8N2S1 1624 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 ZNF541Q9H0D2 1346 aa13.59□□□□□ -0.23
DDX11-223ENST00000542838 TM9SF1O15321 606 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 TBXAS1P24557 533 aaPredicted RBP13.58□□□□□ -0.23
DDX11-223ENST00000542838 CDKN2BP42772 138 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 PSMC4P43686 418 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 SP4Q02446 784 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 MTM1Q13496 603 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 DLGAP5Q15398 846 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 KLHL38Q2WGJ6 581 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 SWSAP1Q6NVH7 229 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 DSTYKQ6XUX3 929 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 PPIL6Q8IXY8 311 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 ZNF276Q8N554 614 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 ATP6V0A1Q93050 837 aa13.58□□□□□ -0.23
DDX11-223ENST00000542838 RBAKQ9NYW8 714 aaPredicted RBP13.58□□□□□ -0.23
DDX11-223ENST00000542838 SAE1Q9UBE0 346 aaPredicted RBP13.58□□□□□ -0.23
DDX11-223ENST00000542838 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.23
DDX11-223ENST00000542838 KIF3CO14782 793 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 NVLO15381 856 aaKnown RBP13.58□□□□□ -0.24
DDX11-223ENST00000542838 CALB1P05937 261 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 CALRP27797 417 aaKnown RBP13.58□□□□□ -0.24
DDX11-223ENST00000542838 ARFIP2P53365 341 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 LRRC6Q86X45 466 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 PALM2Q8IXS6 379 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 BANPQ8N9N5 519 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 FBXO36Q8NEA4 188 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 RDM1Q8NG50 284 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 CPT1BQ92523 772 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 ZBTB45Q96K62 511 aaPredicted RBP13.58□□□□□ -0.24
DDX11-223ENST00000542838 TUBB6Q9BUF5 446 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 TSSK1BQ9BXA7 367 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 DDX56Q9NY93 547 aaKnown RBP13.58□□□□□ -0.24
DDX11-223ENST00000542838 FETUBQ9UGM5 382 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 AGTPBP1Q9UPW5 1226 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 ARID2Q68CP9 1835 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 GDF10P55107 478 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 ZBTB16Q05516 673 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 KLC1Q07866 573 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 SLC35B2Q8TB61 432 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 NSL1Q96IY1 281 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 VPS11Q9H270 941 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 ACSS3Q9H6R3 686 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 PDLIM7Q9NR12 457 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 NMRK1Q9NWW6 199 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 SNCAIPQ9Y6H5 919 aa13.58□□□□□ -0.24
DDX11-223ENST00000542838 EME2A4GXA9 379 aaPredicted RBP13.57□□□□□ -0.24
DDX11-223ENST00000542838 H0YCG3 227 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 GYG2O15488 501 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 GSC2O15499 205 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 STBD1O95210 358 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 NEFHP12036 1026 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 PTPN7P35236 360 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 VHLP40337 213 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 TUBP50607 506 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 RTP1P59025 263 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 MXRA7P84157 204 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 OTUD4Q01804 1114 aaKnown RBP13.57□□□□□ -0.24
DDX11-223ENST00000542838 BBS9Q3SYG4 887 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 ZC3H12AQ5D1E8 599 aaKnown RBP13.57□□□□□ -0.24
DDX11-223ENST00000542838 MZB1Q8WU39 189 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 PTPRN2Q92932 1015 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 ALKBH8Q96BT7 664 aaKnown RBP13.57□□□□□ -0.24
DDX11-223ENST00000542838 ZNF333Q96JL9 665 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 DHRS4Q9BTZ2 278 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 MAP3K20Q9NYL2 800 aaKnown RBP13.57□□□□□ -0.24
DDX11-223ENST00000542838 CNTN6Q9UQ52 1028 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 CTDP1Q9Y5B0 961 aaPredicted RBP13.57□□□□□ -0.24
DDX11-223ENST00000542838 H0YIN7 160 aa13.57□□□□□ -0.24
DDX11-223ENST00000542838 ASNSP08243 561 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms