RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 NPPBP16860 134 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 EGR1P18146 543 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 SDHBP21912 280 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 PTPN7P35236 360 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 ATXN1P54253 815 aaKnown RBP4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 AP2B1P63010 937 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 POU6F2P78424 691 aaPredicted RBP4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 CUL4BQ13620 913 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 SLC12A1Q13621 1099 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 KRT32Q14532 448 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 MAPKAPK3Q16644 382 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 PABPC1LQ4VXU2 614 aaKnown RBP4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 ARMC3Q5W041 872 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 TMEM132EQ6IEE7 984 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 KRT28Q7Z3Y7 464 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 GALNT5Q7Z7M9 940 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 ANKRD52Q8NB46 1076 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 RFFLQ8WZ73 363 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 CFHR4Q92496 578 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 SPSB4Q96A44 273 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 HVCN1Q96D96 273 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 COG8Q96MW5 612 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 C7orf26Q96N11 449 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 DDX23Q9BUQ8 820 aaKnown RBP4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 RSPH9Q9H1X1 276 aaPredicted RBP4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 PABPC3Q9H361 631 aaKnown RBP4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 ZNF552Q9H707 407 aaPredicted RBP4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 PRDM8Q9NQV8 689 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 KCND1Q9NSA2 647 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 ANKEF1Q9NU02 776 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 USP40Q9NVE5 1235 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 SPATA6Q9NWH7 488 aaPredicted RBP4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 TMEM160Q9NX00 188 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 NSMCE4AQ9NXX6 385 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 MOCS1Q9NZB8 636 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 CFAP97Q9P2B7 532 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 RGS17Q9UGC6 210 aaPredicted RBP4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 FBXO10Q9UK96 956 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 ARHGAP26Q9UNA1 814 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 GPR34Q9UPC5 381 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 SHROOM2Q13796 1616 aa4.46□□□□□ -1.69
SFSWAP-211ENST00000542813 SPATA31D1Q6ZQQ2 1576 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 A0A1W2PPH5 198 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 PGPEP1LA6NFU8 196 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 MYO1CO00159 1063 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 KCNQ3O43525 872 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 INMTO95050 263 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 GJB1P08034 283 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 SBK3P0C264 359 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 RARBP10826 455 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 VDRP11473 427 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 MTHFD1P11586 935 aaKnown RBP4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 GYS1P13807 737 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 GYPEP15421 78 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 ACVR2AP27037 513 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 KRT20P35900 424 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 ALDH1A3P47895 512 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 SLC11A2P49281 568 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 AARSP49588 968 aaKnown RBP eCLIP4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 CCR5P51681 352 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 STAT5BP51692 787 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 SEC24CP53992 1094 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 PNLIPRP1P54315 467 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 ACTR2P61160 394 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 MXRA7P84157 204 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 CHRNDQ07001 517 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 SP140Q13342 867 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 MEA1Q16626 185 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 ZNF385BQ569K4 471 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 SPECC1Q5M775 1068 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 TMTC4Q5T4D3 741 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 C1QTNF12Q5T7M4 302 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 ZC3H14Q6PJT7 736 aaKnown RBP4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 CRTC1Q6UUV9 634 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 KIAA0408Q6ZU52 694 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 ANKRD23Q86SG2 305 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 SLC44A2Q8IWA5 706 aaPredicted RBP4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 LSMEM1Q8N8F7 131 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 IL17RDQ8NFM7 739 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 OR1N1Q8NGS0 311 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 SDF4Q9BRK5 362 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 RTKNQ9BST9 563 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 AP1M1Q9BXS5 423 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 PACSIN1Q9BY11 444 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 AGXT2Q9BYV1 514 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 LMAN2LQ9H0V9 348 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 PCDHAC1Q9H158 963 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 TAF1DQ9H5J8 278 aaPredicted RBP4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 ZCCHC4Q9H5U6 513 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 GCM1Q9NP62 436 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 RLIMQ9NVW2 624 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 ORC3Q9UBD5 711 aaPredicted RBP4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 CDC42EP3Q9UKI2 254 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 CNOT6Q9ULM6 557 aaKnown RBP4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 PLEKHM1Q9Y4G2 1056 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 TOP2BQ02880 1626 aa4.46□□□□□ -1.7
SFSWAP-211ENST00000542813 CCDC88BA6NC98 1476 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 PRSS29PA6NIE9 313 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 RAB27BO00194 218 aa4.45□□□□□ -1.7
SFSWAP-211ENST00000542813 RFXAPO00287 272 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms