RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 NCALDP61601 193 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 IFI16Q16666 785 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 EXOC3L4Q17RC7 722 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 CBWD6Q4V339 395 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 EAPPQ56P03 285 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 CBWD3Q5JTY5 395 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 CBWD5Q5RIA9 395 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 C1orf220Q5T0J3 134 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 FAM102BQ5T8I3 360 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 TMEM154Q6P9G4 183 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 MAP4K3Q8IVH8 894 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 CBWD1Q9BRT8 395 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 ISCUQ9H1K1 167 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 CYP26B1Q9NR63 512 aa8.43□□□□□ -1.06
PDLIM5-221ENST00000542407 GSTTP1A0A1W2PQM5 241 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 RECKO95980 971 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 ADSSP30520 456 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 TSPAN7P41732 249 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 MSH2P43246 934 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 FMO5P49326 533 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 ARID5AQ03989 594 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 AGBL2Q5U5Z8 902 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 RNF220Q5VTB9 566 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 IRGCQ6NXR0 463 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 SLC39A4Q6P5W5 647 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 FASTKD5Q7L8L6 764 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 DPH6Q7L8W6 267 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 TAS1R3Q7RTX0 852 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 CACNA2D4Q7Z3S7 1137 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 ARL6IP6Q8N6S5 226 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 PLEKHO2Q8TD55 490 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 MGARPQ8TDB4 240 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 DYDC1Q8WWB3 177 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 ABHD8Q96I13 439 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 CEP170P1Q96L14 293 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 KIFC3Q9BVG8 833 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 DDX47Q9H0S4 455 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 INTS9Q9NV88 658 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 ADAM22Q9P0K1 906 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 GTF3C4Q9UKN8 822 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 MAPK13O15264 365 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 DKC1O60832 514 aaKnown RBP eCLIP8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 SUPT3HO75486 399 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 DGAT1O75907 488 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 ARIH2O95376 493 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 SERPING1P05155 500 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 PGK2P07205 417 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 PAEPP09466 180 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 RARAP10276 462 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 SERPINB4P48594 390 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 SNRPFP62306 86 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 SP4Q02446 784 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 PLOD1Q02809 727 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 BFSP1Q12934 665 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 TOMM20Q15388 145 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 XKR3Q5GH77 459 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 CFAP157Q5JU67 520 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 ANO7Q6IWH7 933 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 TAOK1Q7L7X3 1001 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 TRMT1LQ7Z2T5 733 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 IRF2BP2Q7Z5L9 587 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 FLCNQ8NFG4 579 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 LMO3Q8TAP4 145 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 GDAP1Q8TB36 358 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 FBF1Q8TES7 1133 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 SGCDQ92629 289 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 KIFAP3Q92845 792 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 SYT15Q9BQS2 421 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 GOLPH3Q9H4A6 298 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 CNOT10Q9H9A5 744 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 C17orf75Q9HAS0 396 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 GCNT4Q9P109 453 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 DLGAP2Q9P1A6 1054 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 PNMA3Q9UL41 463 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 TMCO1Q9UM00 188 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 TBX20Q9UMR3 447 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 NENFQ9UMX5 172 aa8.42□□□□□ -1.06
PDLIM5-221ENST00000542407 ANKRD63C9JTQ0 380 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 PJA2O43164 708 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 TRIM49P0CI25 452 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 TRIM49CP0CI26 452 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 RAD23BP54727 409 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 DLG4P78352 724 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 SNAPC2Q13487 334 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 DSG2Q14126 1118 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 HIC1Q14526 733 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 ITIH4Q14624 930 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 CCDC38Q502W7 563 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 TCERG1LQ5VWI1 586 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 HELQQ8TDG4 1101 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 STK32AQ8WU08 396 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 C8orf48Q96LL4 319 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 NIFKQ9BYG3 293 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 GPR88Q9GZN0 384 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 HSPBP1Q9NZL4 362 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 RNF14Q9UBS8 474 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 SEPT9Q9UHD8 586 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 TSKSQ9UJT2 592 aa8.41□□□□□ -1.06
PDLIM5-221ENST00000542407 KIAA1257Q9ULG3 409 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms