RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	CIT	O14578	2027 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	CCDC163	A0A0D9SF12	145 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	MED19	A0JLT2	244 aa	Predicted RBP	11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	CHURC1-FNTB	B4DL54	471 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	EXTL3	O43909	919 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	PRAMEF12	O95522	483 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	F11	P03951	625 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	ITGB3	P05106	788 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	HMGA1	P17096	107 aa	Known RBP	11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	SYT1	P21579	422 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	PCSK1	P29120	753 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	POLR2B	P30876	1174 aa	Known RBP	11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	STAT6	P42226	847 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	FNTB	P49356	437 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	CYP4F8	P98187	520 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	KCNA1	Q09470	495 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	MYO1E	Q12965	1108 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	RUNX3	Q13761	415 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	CCIN	Q13939	588 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	SLC39A14	Q15043	492 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	PON2	Q15165	354 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	SURF1	Q15526	300 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	DPH6	Q7L8W6	267 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	BRSK2	Q8IWQ3	736 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	CCDC65	Q8IXS2	484 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	EFCAB13	Q8IY85	973 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	PDCL2	Q8N4E4	241 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	MAB21L3	Q8N8X9	362 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	TTC8	Q8TAM2	541 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	LEO1	Q8WVC0	666 aa	Predicted RBP	11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	CLIC6	Q96NY7	704 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	PANK2	Q9BZ23	570 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	KIF9	Q9HAQ2	790 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	KIAA1586	Q9HCI6	787 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	RBM12	Q9NTZ6	932 aa	Known RBP	11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	PANK4	Q9NVE7	773 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	DDX43	Q9NXZ2	648 aa	Known RBP	11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	TBC1D7	Q9P0N9	293 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	MYH15	Q9Y2K3	1946 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	ZFHX4	Q86UP3	3567 aa		11.44	□□□□□ -0.58
ARAP1-215	ENST00000542264	SPTBN2	O15020	2390 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	ZNF233	A6NK53	670 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264		K7ESF4	209 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	TRDMT1	O14717	391 aa	Known RBP	11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	CEBPZ	Q03701	1054 aa	Known RBP	11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	TNK2	Q07912	1038 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	SPEM2	Q0P670	501 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	ZNF268	Q14587	947 aa	Predicted RBP	11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	PDGFRL	Q15198	375 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	CSRP2	Q16527	193 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	LPAL2	Q16609	132 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	DUOXA2	Q1HG44	320 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	CEP68	Q76N32	757 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	WDR5B	Q86VZ2	330 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	TOP6BL	Q8N6T0	577 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	C1orf127	Q8N9H9	656 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	FSIP1	Q8NA03	581 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	CCDC26	Q8TAB7	109 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	USP13	Q92995	863 aa	Predicted RBP	11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	SAAL1	Q96ER3	474 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	TRMT2B	Q96GJ1	504 aa	Known RBP	11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	INTS4	Q96HW7	963 aa	Known RBP	11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	MYRFL	Q96LU7	910 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	CEP295NL	Q96MC4	621 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	PI4K2A	Q9BTU6	479 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	IKZF4	Q9H2S9	585 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	GTF3C4	Q9UKN8	822 aa		11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.43	□□□□□ -0.58
ARAP1-215	ENST00000542264	FRMD3	A2A2Y4	597 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	GABRD	O14764	452 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	KRT19	P08727	400 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	DRD1	P21728	446 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	CYP2F1	P24903	491 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	CDR1	P51861	262 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	AMPD3	Q01432	767 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	REST	Q13127	1097 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	MAPRE1	Q15691	268 aa	Known RBP	11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	DDR2	Q16832	855 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	CFAP221	Q4G0U5	840 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	FBXO43	Q4G163	708 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	TMEM196	Q5HYL7	178 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	INTS6L	Q5JSJ4	861 aa	Known RBP	11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	TXNDC8	Q6A555	127 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	HEATR6	Q6AI08	1181 aa	Known RBP	11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264		Q6ZS52	159 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	TMEM150A	Q86TG1	271 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	NETO1	Q8TDF5	533 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	ANKRD36BP1	Q96IX9	119 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	LOXL4	Q96JB6	756 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	SMG9	Q9H0W8	520 aa	Known RBP	11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	PDE11A	Q9HCR9	933 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	PARD6A	Q9NPB6	346 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	SEMA4G	Q9NTN9	838 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	TMLHE	Q9NVH6	421 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	EHD2	Q9NZN4	543 aa		11.42	□□□□□ -0.58
ARAP1-215	ENST00000542264	L1RE1	Q9UN81	338 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms