RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 MED19A0JLT2 244 aaPredicted RBP21.38■■□□□ 1.01
DDX11-220ENST00000542244 K7ELQ4 463 aaPredicted RBP21.38■■□□□ 1.01
DDX11-220ENST00000542244 DPYSL4O14531 572 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 PRPF40AO75400 957 aaKnown RBP21.38■■□□□ 1.01
DDX11-220ENST00000542244 KRT19P08727 400 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 VEPH1Q14D04 833 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 STK38Q15208 465 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 SOWAHAQ2M3V2 549 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 FOXD4L6Q3SYB3 417 aaPredicted RBP21.38■■□□□ 1.01
DDX11-220ENST00000542244 ARHGAP15Q53QZ3 475 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 SHC4Q6S5L8 630 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 FOXD4L3Q6VB84 417 aaPredicted RBP21.38■■□□□ 1.01
DDX11-220ENST00000542244 NT5DC4Q86YG4 428 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 MAB21L3Q8N8X9 362 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 BPIFB1Q8TDL5 484 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 USP13Q92995 863 aaPredicted RBP21.38■■□□□ 1.01
DDX11-220ENST00000542244 ZNF560Q96MR9 790 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 HPS4Q9NQG7 708 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 POLR3BQ9NW08 1133 aaPredicted RBP21.38■■□□□ 1.01
DDX11-220ENST00000542244 MAGED2Q9UNF1 606 aaPredicted RBP21.38■■□□□ 1.01
DDX11-220ENST00000542244 NME7Q9Y5B8 376 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 SNX9Q9Y5X1 595 aa21.38■■□□□ 1.01
DDX11-220ENST00000542244 KIF26AQ9ULI4 1882 aaPredicted RBP21.38■■□□□ 1.01
DDX11-220ENST00000542244 CHURC1-FNTBB4DL54 471 aa21.37■■□□□ 1.01
DDX11-220ENST00000542244 K7ESF4 209 aa21.37■■□□□ 1.01
DDX11-220ENST00000542244 LMO2P25791 158 aa21.37■■□□□ 1.01
DDX11-220ENST00000542244 FNTBP49356 437 aa21.37■■□□□ 1.01
DDX11-220ENST00000542244 ARHGAP29Q52LW3 1261 aa21.37■■□□□ 1.01
DDX11-220ENST00000542244 INTS6LQ5JSJ4 861 aaKnown RBP21.37■■□□□ 1.01
DDX11-220ENST00000542244 MAMSTRQ6ZN01 415 aa21.37■■□□□ 1.01
DDX11-220ENST00000542244 DCP1BQ8IZD4 617 aaKnown RBP21.37■■□□□ 1.01
DDX11-220ENST00000542244 CMTM8Q8IZV2 173 aa21.37■■□□□ 1.01
DDX11-220ENST00000542244 C2orf15Q8WU43 125 aaKnown RBP21.37■■□□□ 1.01
DDX11-220ENST00000542244 SLC22A12Q96S37 553 aa21.37■■□□□ 1.01
DDX11-220ENST00000542244 GKN1Q9NS71 199 aa21.37■■□□□ 1.01
DDX11-220ENST00000542244 KBTBD4Q9NVX7 518 aa21.37■■□□□ 1.01
DDX11-220ENST00000542244 NCDNQ9UBB6 729 aa21.37■■□□□ 1.01
DDX11-220ENST00000542244 SPTLC2O15270 562 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 HRO43593 1189 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 FGF19O95750 216 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 ARSAP15289 507 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 WEE1P30291 646 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 CDC25CP30307 473 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 MLLT6P55198 1093 aaPredicted RBP21.36■■□□□ 1.01
DDX11-220ENST00000542244 GPD1LQ8N335 351 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 LRRC52Q8N7C0 313 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 KBTBD7Q8WVZ9 684 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 DHX58Q96C10 678 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 FAM83CQ9BQN1 747 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 TRIM9Q9C026 710 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 ZSCAN16Q9H4T2 348 aaPredicted RBP21.36■■□□□ 1.01
DDX11-220ENST00000542244 C8orf33Q9H7E9 229 aaPredicted RBP21.36■■□□□ 1.01
DDX11-220ENST00000542244 FBRSL1Q9HCM7 1045 aaKnown RBP21.36■■□□□ 1.01
DDX11-220ENST00000542244 INTS13Q9NVM9 706 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 GDAP2Q9NXN4 497 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 OBP2AQ9NY56 170 aa21.36■■□□□ 1.01
DDX11-220ENST00000542244 OBSL1O75147 1896 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 GABRDO14764 452 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 TGFB1I1O43294 461 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 LDHAP00338 332 aaKnown RBP21.35■■□□□ 1.01
DDX11-220ENST00000542244 PNPLA4P41247 253 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 CXCL12P48061 93 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 PSMC1P62191 440 aaKnown RBP21.35■■□□□ 1.01
DDX11-220ENST00000542244 TAF12Q16514 161 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 RSPO4Q2I0M5 234 aaPredicted RBP21.35■■□□□ 1.01
DDX11-220ENST00000542244 HEATR6Q6AI08 1181 aaKnown RBP21.35■■□□□ 1.01
DDX11-220ENST00000542244 CCDC65Q8IXS2 484 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 CYP2S1Q96SQ9 504 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 ACBD6Q9BR61 282 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 EBF3Q9H4W6 596 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 ITGA11Q9UKX5 1188 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 CEP250Q9BV73 2442 aa21.35■■□□□ 1.01
DDX11-220ENST00000542244 CACNA1AO00555 2505 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 HUS1O60921 280 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 CCR3P51677 355 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 RBP5P82980 135 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 TSPY1Q01534 308 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 SMARCB1Q12824 385 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 CCINQ13939 588 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 EPM2AIP1Q7L775 607 aaPredicted RBP21.34■■□□□ 1.01
DDX11-220ENST00000542244 ERMP1Q7Z2K6 904 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 LIMS2Q7Z4I7 341 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 RALGPS2Q86X27 583 aaPredicted RBP21.34■■□□□ 1.01
DDX11-220ENST00000542244 ADGRF2Q8IZF7 708 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 SPEM1Q8N4L4 309 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 CELF5Q8N6W0 485 aaKnown RBP21.34■■□□□ 1.01
DDX11-220ENST00000542244 RDH13Q8NBN7 331 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 CACTINQ8WUQ7 758 aaKnown RBP21.34■■□□□ 1.01
DDX11-220ENST00000542244 GZF1Q9H116 711 aaPredicted RBP21.34■■□□□ 1.01
DDX11-220ENST00000542244 CRTAC1Q9NQ79 661 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 DLL3Q9NYJ7 618 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 HSPBP1Q9NZL4 362 aa21.34■■□□□ 1.01
DDX11-220ENST00000542244 DENND4CQ5VZ89 1909 aa21.33■■□□□ 1.01
DDX11-220ENST00000542244 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.33■■□□□ 1.01
DDX11-220ENST00000542244 CST3P01034 146 aaPredicted RBP21.33■■□□□ 1.01
DDX11-220ENST00000542244 TMEM191BP0C7N4 346 aa21.33■■□□□ 1.01
DDX11-220ENST00000542244 ALCAMQ13740 583 aa21.33■■□□□ 1.01
DDX11-220ENST00000542244 PKP1Q13835 747 aa21.33■■□□□ 1.01
DDX11-220ENST00000542244 FSTL4Q6MZW2 842 aa21.33■■□□□ 1.01
DDX11-220ENST00000542244 LEO1Q8WVC0 666 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms