RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 PHF2O75151 1096 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 PDGFRBP09619 1106 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 RALAP11233 206 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 RGS7P49802 495 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 PAK2Q13177 524 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 RAB6CQ53S08 254 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 EMBQ6PCB8 327 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 MAATS1Q7Z4T9 603 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 XYLT1Q86Y38 959 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 JAMLQ86YT9 394 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 CCDC50Q8IVM0 306 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 NME8Q8N427 588 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 C3orf20Q8ND61 904 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 BEST2Q8NFU1 509 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 CCDC26Q8TAB7 109 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 HHIPL1Q96JK4 782 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 NT5C1AQ9BXI3 368 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 RAB6CQ9H0N0 254 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 PTGESO14684 152 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 STAU1O95793 577 aaKnown RBP18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 AXLP30530 894 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 NOGQ13253 232 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 PDCLQ13371 301 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 CNGA2Q16280 664 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 SGO2Q562F6 1265 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 TAF2Q6P1X5 1199 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 CCDC137Q6PK04 289 aaKnown RBP18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 CD99L2Q8TCZ2 262 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 CAVIN3Q969G5 261 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 PIRO00625 290 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 FSCN2O14926 492 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 MED7O43513 233 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 VDRP11473 427 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 KRT10P13645 584 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 SYNCQ9H7C4 482 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 METTL5Q9NRN9 209 aaKnown RBP18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 IP6K2Q9UHH9 426 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 FAN1Q9Y2M0 1017 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 DERAQ9Y315 318 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 SNX24Q9Y343 169 aa18.24■□□□□ 0.51
TMEM50B-210ENST00000542230 LAMA2P24043 3122 aaKnown RBP18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 GRAP2O75791 330 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 KRT3P12035 628 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 PCBP1Q15365 356 aaKnown RBP eCLIP18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 TAF5Q15542 800 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 CCSAPQ6IQ19 270 aaPredicted RBP18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 SERINC5Q86VE9 423 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 TTC30AQ86WT1 665 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 RHOT1Q8IXI2 618 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 OR6B3Q8NGW1 331 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 KBTBD7Q8WVZ9 684 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 SENP6Q9GZR1 1112 aaPredicted RBP18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 VIPAS39Q9H9C1 493 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 TRMT13Q9NUP7 481 aaKnown RBP18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 RALGAPA2Q2PPJ7 1873 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 RPS6KA5O75582 802 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 GABBR2O75899 941 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 ALDH1A1P00352 501 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 COILP38432 576 aaPredicted RBP18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 HTRA3P83110 453 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 GOLGA7BQ2TAP0 167 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 DEFB115Q30KQ5 88 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 XKR4Q5GH76 650 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 SH3PXD2AQ5TCZ1 1133 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 DUPD1Q68J44 220 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 APBB1IPQ7Z5R6 666 aaPredicted RBP18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 GSTCDQ8NEC7 633 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 PIK3R5Q8WYR1 880 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 SEC14L1Q92503 715 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 RAPGEF5Q92565 580 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 FAXDC2Q96IV6 333 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 ERP44Q9BS26 406 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 SPC25Q9HBM1 224 aa18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 UBQLN1Q9UMX0 589 aaKnown RBP18.23■□□□□ 0.51
TMEM50B-210ENST00000542230 E5RJQ4 531 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 IL1R2P27930 398 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 THPOP40225 353 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 SMTNL2Q2TAL5 461 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 KCNT1Q5JUK3 1230 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 FBXO47Q5MNV8 452 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 TRNP1Q6NT89 227 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 PMF1Q6P1K2 205 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 KLHDC9Q8NEP7 349 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 MIOSQ9NXC5 875 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 UTP11Q9Y3A2 253 aaKnown RBP18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 TRPV2Q9Y5S1 764 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 HMGCRP04035 888 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 KAZNQ674X7 775 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 LCLAT1Q6UWP7 414 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 PRUNE1Q86TP1 453 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 CCDC105Q8IYK2 499 aa18.22■□□□□ 0.51
TMEM50B-210ENST00000542230 GOLGA6BA6NDN3 693 aa18.21■□□□□ 0.51
TMEM50B-210ENST00000542230 SIGLEC16A6NMB1 481 aa18.21■□□□□ 0.51
TMEM50B-210ENST00000542230 KPNA7A9QM74 516 aa18.21■□□□□ 0.51
TMEM50B-210ENST00000542230 PSTPIP1O43586 416 aa18.21■□□□□ 0.51
TMEM50B-210ENST00000542230 KPNA6O60684 536 aa18.21■□□□□ 0.51
TMEM50B-210ENST00000542230 CCDC130P13994 396 aa18.21■□□□□ 0.51
TMEM50B-210ENST00000542230 KCNE1P15382 129 aa18.21■□□□□ 0.51
TMEM50B-210ENST00000542230 CHRNA3P32297 505 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms