RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 VPS53Q5VIR6 699 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 ZNF788Q6ZQV5 615 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 FAM136AQ96C01 138 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 NELL2Q99435 816 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 PSMD1Q99460 953 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 CGRRF1Q99675 332 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 CDH19Q9H159 772 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 SERHLQ9NQF3 203 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 SERTAD4Q9NUC0 356 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 EHD3Q9NZN3 535 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 G3BP2Q9UN86 482 aaKnown RBP4.56□□□□□ -1.68
LEMD3-204ENST00000542032 RIPOR2Q9Y4F9 1068 aa4.56□□□□□ -1.68
LEMD3-204ENST00000542032 AOX1Q06278 1338 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 CGB1A6NKQ9 187 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 H3BUI4 141 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 RFPL1O75677 317 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 URI1O94763 535 aaPredicted RBP4.55□□□□□ -1.68
LEMD3-204ENST00000542032 CHRM3P20309 590 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 ZNF267Q14586 743 aaPredicted RBP4.55□□□□□ -1.68
LEMD3-204ENST00000542032 DTX2Q86UW9 622 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 SH2D3CQ8N5H7 860 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 FAM46DQ8NEK8 389 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 KLHDC4Q8TBB5 520 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 FKBP10Q96AY3 582 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 MRGPRX1Q96LB2 322 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 ACTRT3Q9BYD9 372 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 TPSD1Q9BZJ3 242 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 CHPF2Q9P2E5 772 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 DKK3Q9UBP4 350 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 GABBR1Q9UBS5 961 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 MED16Q9Y2X0 877 aa4.55□□□□□ -1.68
LEMD3-204ENST00000542032 H3BML4 177 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 INO80B-WBP1J3KQ70 363 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 OFD1O75665 1012 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 JUPP14923 745 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 ZFXP17010 805 aaPredicted RBP4.54□□□□□ -1.68
LEMD3-204ENST00000542032 GPD1P21695 349 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 CD6P30203 668 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 RAB27AP51159 221 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 RAB1AP62820 205 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 BMPR2Q13873 1038 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 AKNAD1Q5T1N1 836 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 IFIT1BQ5T764 474 aaKnown RBP4.54□□□□□ -1.68
LEMD3-204ENST00000542032 ZKSCAN2Q63HK3 967 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 TMED8Q6PL24 325 aaPredicted RBP4.54□□□□□ -1.68
LEMD3-204ENST00000542032 SRRM1Q8IYB3 904 aaKnown RBP4.54□□□□□ -1.68
LEMD3-204ENST00000542032 CELF5Q8N6W0 485 aaKnown RBP4.54□□□□□ -1.68
LEMD3-204ENST00000542032 SLC46A1Q96NT5 459 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 INO80BQ9C086 356 aaPredicted RBP4.54□□□□□ -1.68
LEMD3-204ENST00000542032 CPNE5Q9HCH3 593 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 PLEKHM1Q9Y4G2 1056 aa4.54□□□□□ -1.68
LEMD3-204ENST00000542032 TTLL1O95922 423 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 ATXN1LP0C7T5 689 aaKnown RBP4.53□□□□□ -1.68
LEMD3-204ENST00000542032 DRD4P21917 467 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 PPIFP30405 207 aaKnown RBP4.53□□□□□ -1.68
LEMD3-204ENST00000542032 VIPR2P41587 438 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 ARFIP2P53365 341 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 EPHB1P54762 984 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 LOXL3P58215 753 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 GTF2H3Q13889 308 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 LONRF3Q496Y0 759 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 TSTD2Q5T7W7 516 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 SFRP4Q6FHJ7 346 aaPredicted RBP4.53□□□□□ -1.68
LEMD3-204ENST00000542032 TMEM108Q6UXF1 575 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 EPM2AIP1Q7L775 607 aaPredicted RBP4.53□□□□□ -1.68
LEMD3-204ENST00000542032 ZNF551Q7Z340 670 aaPredicted RBP4.53□□□□□ -1.68
LEMD3-204ENST00000542032 GRAMD1CQ8IYS0 662 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 SLC35G2Q8TBE7 412 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 JPH3Q8WXH2 748 aaPredicted RBP4.53□□□□□ -1.68
LEMD3-204ENST00000542032 TAAR9Q96RI9 348 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 SARS2Q9NP81 518 aaKnown RBP4.53□□□□□ -1.68
LEMD3-204ENST00000542032 PCDHA6Q9UN73 950 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 SSX2IPQ9Y2D8 614 aa4.53□□□□□ -1.68
LEMD3-204ENST00000542032 COL3A1P02461 1466 aaPredicted RBP4.53□□□□□ -1.68
LEMD3-204ENST00000542032 PPM1DO15297 605 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 TPD52L2O43399 206 aaKnown RBP4.52□□□□□ -1.69
LEMD3-204ENST00000542032 AP1G1O43747 822 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 UBXN7O94888 489 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 UNC5CO95185 931 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 NR2F6P10588 404 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 TFF2Q03403 129 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 TBCCQ15814 346 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 KHDC1LQ5JSQ8 128 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 EPHA10Q5JZY3 1008 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 ZNF618Q5T7W0 954 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 TEDDM1Q5T9Z0 273 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 CCDC181Q5TID7 509 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 ICE2Q659A1 982 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 FCRLBQ6BAA4 426 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 PTF1AQ7RTS3 328 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 MAVSQ7Z434 540 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 DENND1CQ8IV53 801 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 TPH2Q8IWU9 490 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.52□□□□□ -1.69
LEMD3-204ENST00000542032 HASPINQ8TF76 798 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 ATRIPQ8WXE1 791 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 DPF1Q92782 380 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 MTFMTQ96DP5 389 aaKnown RBP4.52□□□□□ -1.69
LEMD3-204ENST00000542032 HAPLN3Q96S86 360 aa4.52□□□□□ -1.69
LEMD3-204ENST00000542032 PTDSS2Q9BVG9 487 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms