RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 FZD5Q13467 585 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 MAPRE1Q15691 268 aaKnown RBP12.23□□□□□ -0.45
VTN-203ENST00000542029 CFAP221Q4G0U5 840 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 C4orf50Q6ZRC1 276 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 EPM2AIP1Q7L775 607 aaPredicted RBP12.23□□□□□ -0.45
VTN-203ENST00000542029 RALGPS2Q86X27 583 aaPredicted RBP12.23□□□□□ -0.45
VTN-203ENST00000542029 SPATA2LQ8IUW3 424 aaPredicted RBP12.23□□□□□ -0.45
VTN-203ENST00000542029 ADGRF2Q8IZF7 708 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 CMTM8Q8IZV2 173 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 ZNF687Q8N1G0 1237 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 ZBTB44Q8NCP5 570 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 ZSWIM2Q8NEG5 633 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 CXorf38Q8TB03 319 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 GOLGA5Q8TBA6 731 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 GIPC2Q8TF65 315 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 MRPS31Q92665 395 aaKnown RBP12.23□□□□□ -0.45
VTN-203ENST00000542029 SECISBP2LQ93073 1101 aaKnown RBP12.23□□□□□ -0.45
VTN-203ENST00000542029 HPDLQ96IR7 371 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 CEP295NLQ96MC4 621 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 KIF9Q9HAQ2 790 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 LMAN1LQ9HAT1 526 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 PRMT8Q9NR22 394 aaPredicted RBP12.23□□□□□ -0.45
VTN-203ENST00000542029 SIX4Q9UIU6 781 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 NOTCH4Q99466 2003 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 MYH11P35749 1972 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 MYBPHLA2RUH7 354 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 CCNE1P24864 410 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 MAGEA11P43364 429 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 NLRP12P59046 1061 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 AMPD2Q01433 879 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 MTAPQ13126 283 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 SNRNP35Q16560 246 aaKnown RBP12.22□□□□□ -0.45
VTN-203ENST00000542029 DGKKQ5KSL6 1271 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 STXBP5Q5T5C0 1151 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 CBWD2Q8IUF1 395 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 CEP57L1Q8IYX8 460 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 SYNPOQ8N3V7 929 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 XXYLT1Q8NBI6 393 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 NELL1Q92832 810 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 RSPRY1Q96DX4 576 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 MYRFLQ96LU7 910 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 PI4K2AQ9BTU6 479 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 SLC46A2Q9BY10 475 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 AGPAT3Q9NRZ7 376 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 CDH9Q9ULB4 789 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 PCDHA7Q9UN72 937 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 GPR179Q6PRD1 2367 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 CACNA1IQ9P0X4 2223 aa12.22□□□□□ -0.45
VTN-203ENST00000542029 USP34Q70CQ2 3546 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 TGFB1I1O43294 461 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 F11P03951 625 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 CHRNB1P11230 501 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 HMGA1P17096 107 aaKnown RBP12.21□□□□□ -0.45
VTN-203ENST00000542029 TNNI1P19237 187 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 CTHP32929 405 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 CXCL12P48061 93 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 PDE6CP51160 858 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 CYP4F8P98187 520 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 EHHADHQ08426 723 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 ZNF268Q14587 947 aaPredicted RBP12.21□□□□□ -0.45
VTN-203ENST00000542029 PSMD6Q15008 389 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 BMT2Q1RMZ1 405 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 SOWAHAQ2M3V2 549 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 ITPRIPL2Q3MIP1 535 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 FOXD4L5Q5VV16 416 aaPredicted RBP12.21□□□□□ -0.45
VTN-203ENST00000542029 RESP18Q5W5W9 173 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 CC2D1AQ6P1N0 951 aaPredicted RBP12.21□□□□□ -0.45
VTN-203ENST00000542029 FAM171BQ6P995 826 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 VSTM1Q6UX27 236 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 TRAPPC11Q7Z392 1133 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 LIMS2Q7Z4I7 341 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 MON1AQ86VX9 555 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 C12orf56Q8IXR9 622 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 SPEM1Q8N4L4 309 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 GPR161Q8N6U8 529 aaKnown RBP12.21□□□□□ -0.45
VTN-203ENST00000542029 FSIP1Q8NA03 581 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 OR5B17Q8NGF7 314 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 SCFD1Q8WVM8 642 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 FOXD4L4Q8WXT5 416 aaPredicted RBP12.21□□□□□ -0.45
VTN-203ENST00000542029 HPS3Q969F9 1004 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 EXOC4Q96A65 974 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 TRMT2BQ96GJ1 504 aaKnown RBP12.21□□□□□ -0.45
VTN-203ENST00000542029 PKMYT1Q99640 499 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 HINFPQ9BQA5 517 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 TMLHEQ9NVH6 421 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 EHD2Q9NZN4 543 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 USP25Q9UHP3 1055 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 GTF3C4Q9UKN8 822 aa12.21□□□□□ -0.45
VTN-203ENST00000542029 NCANO14594 1321 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 SPECC1L-ADORA2AF8WAN1 911 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 LILRB5O75023 590 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 TACC1O75410 805 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 NOL4O94818 638 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 PRAMEF12O95522 483 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 MYL1P05976 194 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 SLFN14P0C7P3 912 aa12.2□□□□□ -0.46
VTN-203ENST00000542029 DLATP10515 647 aaKnown RBP12.2□□□□□ -0.46
VTN-203ENST00000542029 WARSP23381 471 aaKnown RBP12.2□□□□□ -0.46
VTN-203ENST00000542029 ACAT1P24752 427 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms