RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CDH7Q9ULB5 785 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 CTNND2Q9UQB3 1225 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 R3HCC1Q9Y3T6 440 aaKnown RBP10.42□□□□□ -0.74
YBX3-212ENST00000542002 CUL9Q8IWT3 2517 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 C2orf16Q68DN1 1984 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 MTCL1Q9Y4B5 1905 aaKnown RBP10.41□□□□□ -0.74
YBX3-212ENST00000542002 PSMA7O14818 248 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 NARSO43776 548 aaKnown RBP10.41□□□□□ -0.74
YBX3-212ENST00000542002 FAM163BP0C2L3 166 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 KRT13P13646 458 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 ALADP13716 330 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 HMGA1P17096 107 aaKnown RBP10.41□□□□□ -0.74
YBX3-212ENST00000542002 PTPN1P18031 435 aaKnown RBP10.41□□□□□ -0.74
YBX3-212ENST00000542002 ASPAP45381 313 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 ALDH1A3P47895 512 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 TUFMP49411 452 aaKnown RBP10.41□□□□□ -0.74
YBX3-212ENST00000542002 CACNA2D1P54289 1103 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 EPHA5P54756 1037 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 TNNC1P63316 161 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 MYL7Q01449 175 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 TSPY1Q01534 308 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 MTMR3Q13615 1198 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 ZNF699Q32M78 642 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 MGAT5BQ3V5L5 792 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 GAREM2Q75VX8 874 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 FILIP1Q7Z7B0 1213 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 SLC44A3Q8N4M1 653 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 OR6B3Q8NGW1 331 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 SHKBP1Q8TBC3 707 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 SPATA18Q8TC71 538 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 FGF14Q92915 247 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 TATDN2Q93075 761 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 MCRS1Q96EZ8 462 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 ASIC4Q96FT7 647 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 SEPT5Q99719 369 aaPredicted RBP10.41□□□□□ -0.74
YBX3-212ENST00000542002 TSG101Q99816 390 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 GTPBP4Q9BZE4 634 aaKnown RBP10.41□□□□□ -0.74
YBX3-212ENST00000542002 PLA2G2FQ9BZM2 168 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 TMEM8AQ9HCN3 771 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 TMEM30AQ9NV96 361 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 CDH9Q9ULB4 789 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 MRPS23Q9Y3D9 190 aaKnown RBP10.41□□□□□ -0.74
YBX3-212ENST00000542002 PCDHB5Q9Y5E4 795 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 NOTCH4Q99466 2003 aa10.41□□□□□ -0.74
YBX3-212ENST00000542002 TSC2P49815 1807 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 DOCK6Q96HP0 2047 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 CLDN5O00501 218 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 SLC16A3O15427 465 aaKnown RBP10.4□□□□□ -0.74
YBX3-212ENST00000542002 GPR37L1O60883 481 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 EPB41P11171 864 aaKnown RBP10.4□□□□□ -0.74
YBX3-212ENST00000542002 MYL4P12829 197 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 PCSK1P29120 753 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 GTF2H1P32780 548 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 EPHB3P54753 998 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 SMARCB1Q12824 385 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 ORC1Q13415 861 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 STIM1Q13586 685 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 HTR4Q13639 388 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 TEAD2Q15562 447 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 ZNF667Q5HYK9 610 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 MDH1BQ5I0G3 518 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 STXBP5Q5T5C0 1151 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 KRT39Q6A163 491 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 IQCEQ6IPM2 695 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 SCARA5Q6ZMJ2 495 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 TRIM67Q6ZTA4 783 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 PAQR9Q6ZVX9 377 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 TMEM150AQ86TG1 271 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 GPIHBP1Q8IV16 184 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 TRIML1Q8N9V2 468 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 MYCBPAPQ8TBZ2 947 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 SPPL2BQ8TCT7 592 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 C2orf15Q8WU43 125 aaKnown RBP10.4□□□□□ -0.74
YBX3-212ENST00000542002 TAF4BQ92750 862 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 PSMG2Q969U7 264 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 SLC35C1Q96A29 364 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 MYLPFQ96A32 169 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 PCED1BQ96HM7 432 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 TWNKQ96RR1 684 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 SYT15Q9BQS2 421 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 LRFN3Q9BTN0 628 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 SRRTQ9BXP5 876 aaKnown RBP10.4□□□□□ -0.74
YBX3-212ENST00000542002 B3GNT5Q9BYG0 378 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 SNX25Q9H3E2 840 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 IL21Q9HBE4 155 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 HMGXB4Q9UGU5 601 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 SORCS3Q9UPU3 1222 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 NUMBLQ9Y6R0 609 aa10.4□□□□□ -0.74
YBX3-212ENST00000542002 A0A1W2PRU2 124 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 A8MXQ7 604 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 MICAL2O94851 1124 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 PDGFBP01127 241 aaPredicted RBP10.39□□□□□ -0.75
YBX3-212ENST00000542002 BDNFP23560 247 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 FCARP24071 287 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 PIK3CAP42336 1068 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 PAK1Q13153 545 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 TDGQ13569 410 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 NFE2Q16621 373 aaPredicted RBP10.39□□□□□ -0.75
YBX3-212ENST00000542002 CFAP221Q4G0U5 840 aa10.39□□□□□ -0.75
YBX3-212ENST00000542002 DCAF17Q5H9S7 520 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms