RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 TMEM109Q9BVC6 243 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 GRIP2Q9C0E4 1043 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 MTMR12Q9C0I1 747 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PITHD1Q9GZP4 211 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 KLC2Q9H0B6 622 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ISCUQ9H1K1 167 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 KCNK13Q9HB14 408 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 USP29Q9HBJ7 922 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 SIRT5Q9NXA8 310 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 TOR4AQ9NXH8 423 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ARHGAP26Q9UNA1 814 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 AP3M1Q9Y2T2 418 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 FCF1Q9Y324 198 aaKnown RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF175Q9Y473 711 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PCDHB12Q9Y5F1 795 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 PCDHGA3Q9Y5H0 932 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 EPN1Q9Y6I3 576 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 CSNK1G3Q9Y6M4 447 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 RIMBP3CA6NJZ7 1639 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 RIMBP3BA6NNM3 1639 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 RIMBP3Q9UFD9 1639 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 IQSEC2Q5JU85 1478 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 CDK12Q9NYV4 1490 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-218ENST00000541615 ZMYM6O95789 1325 aa5.43□□□□□ -1.54
SNHG1-218ENST00000541615 RNF17Q9BXT8 1623 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 EIF2AK4Q9P2K8 1649 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 FAM237AA0A1B0GTK4 181 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 EFCAB10A6NFE3 127 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 PRSS44E7EML9 344 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CAPN9O14815 690 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 RASGRF2O14827 1237 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 KCNQ3O43525 872 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 MAN1A2O60476 641 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 PDE8AO60658 829 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CRTAPO75718 401 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 SULT1C4O75897 302 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 SLITRK3O94933 977 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CSPG5O95196 566 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ARIH2O95376 493 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 NPPAP01160 153 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 C8BP07358 591 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 RARBP10826 455 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ETS2P15036 469 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CPA1P15085 419 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 TCEA1P23193 301 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CMA1P23946 247 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 PSMA2P25787 234 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 STX2P32856 288 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 GP5P40197 560 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 GCGRP47871 477 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ZNF135P52742 658 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 PDE1AP54750 535 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ADKP55263 362 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 EIF4A1P60842 406 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 GPR85P60893 370 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 MAGOHP61326 146 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ESRRGP62508 458 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 BNC1Q01954 994 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 KDSRQ06136 332 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 GFPT1Q06210 699 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ENPEPQ07075 957 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 FOXC1Q12948 553 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 BAMBIQ13145 260 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 KRR1Q13601 381 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 PDE1CQ14123 709 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 SIM2Q14190 667 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 SELPLGQ14242 412 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 TOMM20Q15388 145 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 OASLQ15646 514 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CLUL1Q15846 466 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 GEN1Q17RS7 908 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 SMU1Q2TAY7 513 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 USP41Q3LFD5 358 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 DPCR1Q3MIW9 517 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 WDR72Q3MJ13 1102 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ANKRD20A4Q4UJ75 823 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 TIGD2Q4W5G0 525 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 HP1BP3Q5SSJ5 553 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 C10orf62Q5T681 223 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 TATDN1Q6P1N9 297 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CRTC1Q6UUV9 634 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 RAD9BQ6WBX8 426 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 MIGA2Q7L4E1 593 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 EPM2AIP1Q7L775 607 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 TAS2R42Q7RTR8 314 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 PODNQ7Z5L7 613 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 GPBP1Q86WP2 473 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 TMEM126BQ8IUX1 230 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 IFNL3Q8IZI9 196 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 SLC38A6Q8IZM9 456 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 REXO1Q8N1G1 1221 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 LRRC47Q8N1G4 583 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CAMKK1Q8N5S9 505 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 SUPT20HQ8NEM7 779 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 OTUD7AQ8TE49 926 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 ADAMTS16Q8TE57 1224 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 CHAC2Q8WUX2 184 aa5.42□□□□□ -1.54
SNHG1-218ENST00000541615 MAGOHBQ96A72 148 aaKnown RBP5.42□□□□□ -1.54
SNHG1-218ENST00000541615 AIDAQ96BJ3 306 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms