RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 ACAD10Q6JQN1 1059 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 ZNF677Q86XU0 584 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 UBLCP1Q8WVY7 318 aaPredicted RBP16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 ZNF606Q8WXB4 792 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.18■□□□□ 0.182e-7■■■■■ 64.2
CLPTM1-202ENST00000541297 ST3GAL5Q9UNP4 418 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 IPPQ9Y573 584 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 PPEF2O14830 753 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 SART1O43290 800 aaKnown RBP16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 LLGL2Q6P1M3 1020 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 LRRC45Q96CN5 670 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 DDX47Q9H0S4 455 aaKnown RBP16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 ITGA11Q9UKX5 1188 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 NOD1Q9Y239 953 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 GOLGA6L7A0A1B0GV03 622 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 TMEM110-MUSTN1A8MSY1 372 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 IBSPP21815 317 aaPredicted RBP16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 PEX26Q7Z412 305 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 BTBD6Q96KE9 485 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 SENP6Q9GZR1 1112 aaPredicted RBP16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 PLEKHA5Q9HAU0 1116 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 HMGXB4Q9UGU5 601 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 NOVA2Q9UNW9 492 aaKnown RBP16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 DCDC2CA8MYV0 355 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 CDR1P51861 262 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 RBP5P82980 135 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 SESTD1Q86VW0 696 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 EIF1ADQ8N9N8 165 aaKnown RBP16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 SMG8Q8ND04 991 aaKnown RBP16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 RAPGEF5Q92565 580 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 SEC16BQ96JE7 1060 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 ZSWIM1Q9BR11 485 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 BCO2Q9BYV7 579 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 PTCH2Q9Y6C5 1203 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 CES2O00748 559 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 GRK4P32298 578 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 NSFP46459 744 aaKnown RBP16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 PPP2R2AP63151 447 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 ALKAL1Q6UXT8 129 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 RHOT2Q8IXI1 618 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 ARRDC4Q8NCT1 418 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 SH3TC2Q8TF17 1288 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 TFAP2BQ92481 460 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 PBKQ96KB5 322 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 NUP85Q9BW27 656 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 ACTR5Q9H9F9 607 aaPredicted RBP16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 HMX1Q9NP08 348 aaPredicted RBP16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 TRIM17Q9Y577 477 aa16.17■□□□□ 0.18
CLPTM1-202ENST00000541297 MEIS3P2A8K0S8 358 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 DAPK3O43293 454 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 GNRH1P01148 92 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 CYP1A1P04798 512 aaPredicted RBP16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 ATICP31939 592 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 ANKRD20A8PQ5CZ79 823 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 NT5DC4Q86YG4 428 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 ACTRT1Q8TDG2 376 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 TWNKQ96RR1 684 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 AGO3Q9H9G7 860 aaKnown RBP16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 GOLGA2P5Q9HBQ8 144 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 LRRC4CQ9HCJ2 640 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 CNTN3Q9P232 1028 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 ITGA4P13612 1032 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 CD19P15391 556 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 NOMO3P69849 1222 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 MGAT3Q09327 533 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 BYSLQ13895 437 aaKnown RBP16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 LHX8Q68G74 356 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 SLFN11Q7Z7L1 901 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 NT5DC3Q86UY8 548 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 SYCE1Q8N0S2 351 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 FUKQ8N0W3 1084 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 C11orf70Q9BRQ4 267 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 HAUS2Q9NVX0 235 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 AMACRQ9UHK6 382 aa16.16■□□□□ 0.18
CLPTM1-202ENST00000541297 SMIM28A0A1B0GU29 152 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 BHMG1C9JSJ3 638 aaPredicted RBP16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 ATP2C2O75185 946 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 GHRP10912 638 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 MAGOHP61326 146 aaKnown RBP16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 CENPCQ03188 943 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 MESDQ14696 234 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 ZBTB6Q15916 424 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 PREPLQ4J6C6 727 aaPredicted RBP16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 CYB5D1Q6P9G0 228 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 PARP9Q8IXQ6 854 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 MCOLN2Q8IZK6 566 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 C3orf20Q8ND61 904 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 SLAIN1Q8ND83 568 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 GIMAP7Q8NHV1 300 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 ZNF564Q8TBZ8 553 aaPredicted RBP16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 MAGOHBQ96A72 148 aaKnown RBP16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 ZFP42Q96MM3 310 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 GLT1D1Q96MS3 346 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 GTF3C4Q9UKN8 822 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 PGRMC1O00264 195 aaKnown RBP16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 KRIT1O00522 736 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 RRM1P23921 792 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 DPH6Q7L8W6 267 aa16.15■□□□□ 0.18
CLPTM1-202ENST00000541297 BEST2Q8NFU1 509 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms