RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 E7ESA3 106 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 C1QAP02745 245 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 TBXAS1P24557 533 aaPredicted RBP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 BRD2P25440 801 aaKnown RBP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 SP4Q02446 784 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 ZC3H12AQ5D1E8 599 aaKnown RBP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 SNRNP48Q6IEG0 339 aaKnown RBP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 SH2D5Q6ZV89 423 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 SCYL3Q8IZE3 742 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 C4orf33Q8N1A6 199 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 ANKRD35Q8N283 1001 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 TMEM130Q8N3G9 435 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 CCHCR1Q8TD31 782 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 CPT1BQ92523 772 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 MIEF2Q96C03 454 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 IFT74Q96LB3 600 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 CFAP57Q96MR6 1250 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 FNBP1Q96RU3 617 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 PITPNM3Q9BZ71 974 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 XYLT2Q9H1B5 865 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 PCDH9Q9HC56 1237 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 GPRC5DQ9NZD1 345 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 SAE1Q9UBE0 346 aaPredicted RBP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 SNCAIPQ9Y6H5 919 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 TSC2P49815 1807 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 CNMDO75829 334 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 OATP04181 439 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 EZRP15311 586 aaKnown RBP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 GMPSP49915 693 aaPredicted RBP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 MAPK6Q16659 721 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 PARP6Q2NL67 630 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 BRSK2Q8IWQ3 736 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 AGGF1Q8N302 714 aaeCLIP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 NSUN6Q8TEA1 469 aaKnown RBP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 THOC1Q96FV9 657 aaKnown RBP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 SSU72Q9NP77 194 aaKnown RBP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 NKIRAS1Q9NYS0 192 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 H0YCG3 227 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 MSCO60682 206 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 LSM8O95777 96 aaKnown RBP10.05□□□□□ -0.8
CNOT4-212ENST00000541284 IGHA2P01877 340 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 ICAM3P32942 547 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 ASPAP45381 313 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 BACE1P56817 501 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 IL9RQ01113 521 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 NR1H3Q13133 447 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 TFDP3Q5H9I0 405 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 OTOAQ7RTW8 1153 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 DCAKDQ8WVC6 231 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 HAUS1Q96CS2 278 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 TTC25Q96NG3 672 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 TMEM237Q96Q45 408 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 MSTO1Q9BUK6 570 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 TMEM134Q9H6X4 195 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 TLE6Q9H808 572 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 PCDHGC3Q9UN70 934 aa10.05□□□□□ -0.8
CNOT4-212ENST00000541284 PATJQ8NI35 1801 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 TRAFD1O14545 582 aaPredicted RBP10.04□□□□□ -0.8
CNOT4-212ENST00000541284 PEX11AO75192 247 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 PIAS1O75925 651 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 TMEM63AO94886 807 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 CCND1P24385 295 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 CYP4V2Q6ZWL3 525 aaPredicted RBP10.04□□□□□ -0.8
CNOT4-212ENST00000541284 KIRREL3Q8IZU9 778 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 JOSD2Q8TAC2 188 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 TRPM4Q8TD43 1214 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 PHACTR1Q9C0D0 580 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 FETUBQ9UGM5 382 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 SLC24A2Q9UI40 661 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 GSTTP1A0A1W2PQM5 241 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 HGSO14964 777 aaPredicted RBP10.04□□□□□ -0.8
CNOT4-212ENST00000541284 TJP3O95049 919 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 CD48P09326 243 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 MYL6P60660 151 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 LMNB2Q03252 620 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 PTPN20Q4JDL3 420 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 NBPF12Q5TAG4 269 aaPredicted RBP10.04□□□□□ -0.8
CNOT4-212ENST00000541284 CYP4A22Q5TCH4 519 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 GPC2Q8N158 579 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 ERP27Q96DN0 273 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 ADAM33Q9BZ11 813 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 C12orf65Q9H3J6 166 aaKnown RBP10.04□□□□□ -0.8
CNOT4-212ENST00000541284 KLHL14Q9P2G3 628 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 ANKFY1Q9P2R3 1169 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 FZD1Q9UP38 647 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 ZNF148Q9UQR1 794 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 POC1B-GALNT4F8VUJ3 575 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 DKC1O60832 514 aaKnown RBP eCLIP10.04□□□□□ -0.8
CNOT4-212ENST00000541284 LRCH4O75427 683 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 RPSAP08865 295 aaKnown RBP10.04□□□□□ -0.8
CNOT4-212ENST00000541284 HOXC6P09630 235 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 ATF7P17544 494 aaPredicted RBP10.04□□□□□ -0.8
CNOT4-212ENST00000541284 ABCD1P33897 745 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 CBLBQ13191 982 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 GRM1Q13255 1194 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 SPDYAQ5MJ70 313 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 DENND1BQ6P3S1 775 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 ADGRD1Q6QNK2 874 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 GSTA5Q7RTV2 222 aa10.04□□□□□ -0.8
CNOT4-212ENST00000541284 IGDCC3Q8IVU1 814 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms