RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 INSL5Q9Y5Q6 135 aa20.02■□□□□ 0.8
VPS33A-205ENST00000541169 GOLGA6L19H0YKK7 550 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 H3BQ06 376 aaPredicted RBP20.01■□□□□ 0.79
VPS33A-205ENST00000541169 PES1O00541 588 aaKnown RBP20.01■□□□□ 0.79
VPS33A-205ENST00000541169 CILPO75339 1184 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 PDGFRBP09619 1106 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 WEE2P0C1S8 567 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 SPATA31D3P0C874 917 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 LMO2P25791 158 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 EPHB3P54753 998 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 CDH8P55286 799 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 RPL10AP62906 217 aaKnown RBP20.01■□□□□ 0.79
VPS33A-205ENST00000541169 RBM10P98175 930 aaKnown RBP20.01■□□□□ 0.79
VPS33A-205ENST00000541169 KRT31Q15323 416 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 TRIM65Q6PJ69 517 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 LRSAM1Q6UWE0 723 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 SCARA5Q6ZMJ2 495 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 SPATA31D4Q6ZUB0 917 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 ITIH5Q86UX2 942 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 FAM200AQ8TCP9 573 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 ASB2Q96Q27 587 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 INTS2Q9H0H0 1204 aaKnown RBP20.01■□□□□ 0.79
VPS33A-205ENST00000541169 PIDD1Q9HB75 910 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 GTF3C4Q9UKN8 822 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 KIAA1257Q9ULG3 409 aa20.01■□□□□ 0.79
VPS33A-205ENST00000541169 GRXCR2A6NFK2 248 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 MBTPS2O43462 519 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 FGF19O95750 216 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 OR4Q2P0C623 313 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 ACAT1P24752 427 aaKnown RBP20■□□□□ 0.79
VPS33A-205ENST00000541169 NDST1P52848 882 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 MFAP3P55082 362 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 DUSP4Q13115 394 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 VEPH1Q14D04 833 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 IQCB1Q15051 598 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 SMAD2Q15796 467 aaKnown RBP20■□□□□ 0.79
VPS33A-205ENST00000541169 FILIP1LQ4L180 1135 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 HSP90AA4PQ58FG1 418 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 RARS2Q5T160 578 aaKnown RBP20■□□□□ 0.79
VPS33A-205ENST00000541169 IQCEQ6IPM2 695 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 PTCRAQ6ISU1 281 aaPredicted RBP20■□□□□ 0.79
VPS33A-205ENST00000541169 LRRTM3Q86VH5 581 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 PPM1KQ8N3J5 372 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 SUSD6Q92537 303 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 SMG7Q92540 1137 aaKnown RBP20■□□□□ 0.79
VPS33A-205ENST00000541169 TATDN2Q93075 761 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 ELOVL4Q9GZR5 314 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 TSPY26PQ9H489 355 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 CISHQ9NSE2 258 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 EHD2Q9NZN4 543 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 PRKAG3Q9UGI9 489 aa20■□□□□ 0.79
VPS33A-205ENST00000541169 HAPLN1P10915 354 aaPredicted RBP19.99■□□□□ 0.79
VPS33A-205ENST00000541169 ZNF445P59923 1031 aa19.99■□□□□ 0.79
VPS33A-205ENST00000541169 CBX2Q14781 532 aaPredicted RBP19.99■□□□□ 0.79
VPS33A-205ENST00000541169 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.99■□□□□ 0.79
VPS33A-205ENST00000541169 ATAD1Q8NBU5 361 aa19.99■□□□□ 0.79
VPS33A-205ENST00000541169 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.99■□□□□ 0.79
VPS33A-205ENST00000541169 ZNF512Q96ME7 567 aaPredicted RBP19.99■□□□□ 0.79
VPS33A-205ENST00000541169 PGLYRP2Q96PD5 576 aa19.99■□□□□ 0.79
VPS33A-205ENST00000541169 TMEM209Q96SK2 561 aa19.99■□□□□ 0.79
VPS33A-205ENST00000541169 SDCBP2Q9H190 292 aa19.99■□□□□ 0.79
VPS33A-205ENST00000541169 ABI2Q9NYB9 513 aaPredicted RBP19.99■□□□□ 0.79
VPS33A-205ENST00000541169 APEX2Q9UBZ4 518 aa19.99■□□□□ 0.79
VPS33A-205ENST00000541169 BRWD1Q9NSI6 2320 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 MYBPHLA2RUH7 354 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 TRIM66O15016 1216 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 SEC24AO95486 1093 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 PTPN2P17706 415 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 PON1P27169 355 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 RAP1GAPP47736 663 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 MGAT5BQ3V5L5 792 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 TMC5Q6UXY8 1006 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 PCED1BQ96HM7 432 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 TMEM176AQ96HP8 235 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 HSD3B7Q9H2F3 369 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 CBX8Q9HC52 389 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 CRTAC1Q9NQ79 661 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 AVENQ9NQS1 362 aaPredicted RBP19.98■□□□□ 0.79
VPS33A-205ENST00000541169 USP15Q9Y4E8 981 aaPredicted RBP19.98■□□□□ 0.79
VPS33A-205ENST00000541169 YIPF1Q9Y548 306 aa19.98■□□□□ 0.79
VPS33A-205ENST00000541169 LGALS16A8MUM7 142 aa19.97■□□□□ 0.79
VPS33A-205ENST00000541169 RFPL2O75678 378 aa19.97■□□□□ 0.79
VPS33A-205ENST00000541169 PAEPP09466 180 aa19.97■□□□□ 0.79
VPS33A-205ENST00000541169 CD58P19256 250 aa19.97■□□□□ 0.79
VPS33A-205ENST00000541169 COPB1P53618 953 aaKnown RBP19.97■□□□□ 0.79
VPS33A-205ENST00000541169 PSMC1P62191 440 aaKnown RBP19.97■□□□□ 0.79
VPS33A-205ENST00000541169 CYP27A1Q02318 531 aa19.97■□□□□ 0.79
VPS33A-205ENST00000541169 TFF2Q03403 129 aa19.97■□□□□ 0.79
VPS33A-205ENST00000541169 MDH1BQ5I0G3 518 aa19.97■□□□□ 0.79
VPS33A-205ENST00000541169 ZNF707Q96C28 371 aaPredicted RBP19.97■□□□□ 0.79
VPS33A-205ENST00000541169 SEPT5Q99719 369 aaPredicted RBP19.97■□□□□ 0.79
VPS33A-205ENST00000541169 CRACR2AQ9BSW2 395 aa19.97■□□□□ 0.79
VPS33A-205ENST00000541169 VPS16Q9H269 839 aa19.97■□□□□ 0.79
VPS33A-205ENST00000541169 WDR6Q9NNW5 1121 aaKnown RBP19.97■□□□□ 0.79
VPS33A-205ENST00000541169 PLCB1Q9NQ66 1216 aa19.97■□□□□ 0.79
VPS33A-205ENST00000541169 TAB2Q9NYJ8 693 aa19.97■□□□□ 0.79
VPS33A-205ENST00000541169 ZFP37Q9Y6Q3 630 aaPredicted RBP19.97■□□□□ 0.79
VPS33A-205ENST00000541169 ZNF197O14709 1029 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 LRRN2O75325 713 aa19.96■□□□□ 0.79
VPS33A-205ENST00000541169 MICAL2O94851 1124 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms