RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 TAS1R2Q8TE23 839 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 TAF4BQ92750 862 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 FGF13Q92913 245 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 CEP63Q96MT8 703 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 PKMYT1Q99640 499 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 SYT15Q9BQS2 421 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 VRTNQ9H8Y1 702 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 ASAH2Q9NR71 780 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 HSFX1Q9UBD0 423 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 CDH7Q9ULB5 785 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 A8MXQ7 604 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 ZNF197O14709 1029 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 ASS1P00966 412 aaKnown RBP9.86□□□□□ -0.83
SNHG1-215ENST00000540904 FAM163BP0C2L3 166 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 HAPLN1P10915 354 aaPredicted RBP9.86□□□□□ -0.83
SNHG1-215ENST00000540904 MYL4P12829 197 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 LAMP2P13473 410 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 CYP2F1P24903 491 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 CCR2P41597 374 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 MXI1P50539 228 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 NOP14P78316 857 aaKnown RBP9.86□□□□□ -0.83
SNHG1-215ENST00000540904 CYP27A1Q02318 531 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 VEPH1Q14D04 833 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 PTPN21Q16825 1174 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 CCDC40Q4G0X9 1142 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 CBWD6Q4V339 395 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 CBWD3Q5JTY5 395 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 CBWD5Q5RIA9 395 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 CYP4A22Q5TCH4 519 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 DNAJB7Q7Z6W7 309 aaPredicted RBP9.86□□□□□ -0.83
SNHG1-215ENST00000540904 FILIP1Q7Z7B0 1213 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 SPATA2LQ8IUW3 424 aaPredicted RBP9.86□□□□□ -0.83
SNHG1-215ENST00000540904 NPAS3Q8IXF0 933 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 MLKLQ8NB16 471 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 CCDC150Q8NCX0 1101 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 GPR152Q8TDT2 470 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 GIPC2Q8TF65 315 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 RSAD2Q8WXG1 361 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 TCEAL4Q96EI5 215 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 LPIN3Q9BQK8 851 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 SDCBP2Q9H190 292 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 DNAJC25Q9H1X3 360 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 DPEP3Q9H4B8 488 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 KCNK12Q9HB15 430 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 METTL14Q9HCE5 456 aaKnown RBP9.86□□□□□ -0.83
SNHG1-215ENST00000540904 ABCB6Q9NP58 842 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 CRTAC1Q9NQ79 661 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 EPS15L1Q9UBC2 864 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 RWDD2AQ9UIY3 292 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 NME7Q9Y5B8 376 aa9.86□□□□□ -0.83
SNHG1-215ENST00000540904 TSC2P49815 1807 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 FAM86C2PA6NEL3 165 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 NRG2O14511 850 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-215ENST00000540904 LRRN2O75325 713 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 FGFR1OPO95684 399 aaKnown RBP9.85□□□□□ -0.83
SNHG1-215ENST00000540904 GJA1P17302 382 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 CEBPBP17676 345 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 PTPN1P18031 435 aaKnown RBP9.85□□□□□ -0.83
SNHG1-215ENST00000540904 ATF6P18850 670 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 ASPAP45381 313 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 GPR15P49685 360 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 MCCD1P59942 119 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-215ENST00000540904 ZXDAP98168 799 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 MTMR3Q13615 1198 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 MAPRE1Q15691 268 aaKnown RBP9.85□□□□□ -0.83
SNHG1-215ENST00000540904 TAF12Q16514 161 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 DDR2Q16832 855 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 CFAP221Q4G0U5 840 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 MDH1BQ5I0G3 518 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 PRSS36Q5K4E3 855 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 SDHAF4Q5VUM1 108 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 FAM171BQ6P995 826 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 FOXR2Q6PJQ5 311 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 C4orf50Q6ZRC1 276 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 FRMD5Q7Z6J6 570 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 ITIH5Q86UX2 942 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 SCN4BQ8IWT1 228 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 B3GALNT2Q8NCR0 500 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 FBXL13Q8NEE6 735 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 MYCBPAPQ8TBZ2 947 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 SEMA4DQ92854 862 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 PSMG2Q969U7 264 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 SLC35C1Q96A29 364 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 MYLPFQ96A32 169 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 MCRS1Q96EZ8 462 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 PCED1BQ96HM7 432 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 SRRTQ9BXP5 876 aaKnown RBP9.85□□□□□ -0.83
SNHG1-215ENST00000540904 SMOC2Q9H3U7 446 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 APOBEC3GQ9HC16 384 aaKnown RBP9.85□□□□□ -0.83
SNHG1-215ENST00000540904 AVENQ9NQS1 362 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-215ENST00000540904 RAB20Q9NX57 234 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 MAGEC2Q9UBF1 373 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-215ENST00000540904 SORCS3Q9UPU3 1222 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 ASB3Q9Y575 518 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 ZFP37Q9Y6Q3 630 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-215ENST00000540904 MUC3AQ02505 3323 aa9.85□□□□□ -0.83
SNHG1-215ENST00000540904 C2orf16Q68DN1 1984 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 A0A1W2PRU2 124 aa9.84□□□□□ -0.83
SNHG1-215ENST00000540904 ANHXE9PGG2 379 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms