RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PDGFRBP09619 1106 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 RAP1GAPP47736 663 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 GPR15P49685 360 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 EPHB3P54753 998 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 CDH8P55286 799 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 STIM1Q13586 685 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 MTMR3Q13615 1198 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 HTR4Q13639 388 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 SGSM1Q2NKQ1 1148 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 ZNF667Q5HYK9 610 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 SPOPLQ6IQ16 392 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 TRIM67Q6ZTA4 783 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 PDZD4Q76G19 769 aaPredicted RBP18.07■□□□□ 0.48
CD9-209ENST00000540891 DNAJB7Q7Z6W7 309 aaPredicted RBP18.07■□□□□ 0.48
CD9-209ENST00000540891 TRIML1Q8N9V2 468 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 OR6B3Q8NGW1 331 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 TAS1R2Q8TE23 839 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 NELFBQ8WX92 580 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 PI4K2AQ9BTU6 479 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 CLSTN2Q9H4D0 955 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 MMRN2Q9H8L6 949 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 TMEM8AQ9HCN3 771 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 ZNF334Q9HCZ1 680 aaPredicted RBP18.07■□□□□ 0.48
CD9-209ENST00000540891 ASAH2Q9NR71 780 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 IGSF9Q9P2J2 1179 aa18.07■□□□□ 0.48
CD9-209ENST00000540891 TECTAO75443 2155 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 MICAL2O94851 1124 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 MYL4P12829 197 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 GJA1P17302 382 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 CYP2F1P24903 491 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 GNL1P36915 607 aaPredicted RBP18.06■□□□□ 0.48
CD9-209ENST00000540891 PIK3CAP42336 1068 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 TDGQ13569 410 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 TMEM31Q5JXX7 168 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 FOXR2Q6PJQ5 311 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 PARM1Q6UWI2 310 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 TAF4BQ92750 862 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 FGF14Q92915 247 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 MCRS1Q96EZ8 462 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 ASIC4Q96FT7 647 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 LRFN3Q9BTN0 628 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 RPP25Q9BUL9 199 aaKnown RBP18.06■□□□□ 0.48
CD9-209ENST00000540891 DPEP3Q9H4B8 488 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 APOBEC3GQ9HC16 384 aaKnown RBP18.06■□□□□ 0.48
CD9-209ENST00000540891 ABCB6Q9NP58 842 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 CTNND2Q9UQB3 1225 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 ASB3Q9Y575 518 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 NUMBLQ9Y6R0 609 aa18.06■□□□□ 0.48
CD9-209ENST00000540891 ZNF197O14709 1029 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 GTF2H1P32780 548 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 ASPAP45381 313 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 SIGLEC14Q08ET2 396 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 CFAP221Q4G0U5 840 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 CYP4A22Q5TCH4 519 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 KRT39Q6A163 491 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 SCARA5Q6ZMJ2 495 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 SLC44A3Q8N4M1 653 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 LEMD2Q8NC56 503 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 SHKBP1Q8TBC3 707 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 GPR152Q8TDT2 470 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 GIPC2Q8TF65 315 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 SEMA4DQ92854 862 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 NXPE3Q969Y0 559 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 MYLPFQ96A32 169 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 CEP63Q96MT8 703 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 SNX25Q9H3E2 840 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.05■□□□□ 0.48
CD9-209ENST00000540891 GDE1Q9NZC3 331 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 DUSP12Q9UNI6 340 aa18.05■□□□□ 0.48
CD9-209ENST00000540891 PRR33A8MZF0 331 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 NARSO43776 548 aaKnown RBP18.04■□□□□ 0.48
CD9-209ENST00000540891 STX17P56962 302 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 PAK1Q13153 545 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 TEAD2Q15562 447 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 DDR2Q16832 855 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 CBWD6Q4V339 395 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 CBWD3Q5JTY5 395 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 CBWD5Q5RIA9 395 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 SDHAF4Q5VUM1 108 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 GAREM2Q75VX8 874 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 FILIP1Q7Z7B0 1213 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 SPATA2LQ8IUW3 424 aaPredicted RBP18.04■□□□□ 0.48
CD9-209ENST00000540891 UBALD2Q8IYN6 164 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 STKLD1Q8NE28 680 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 MYCBPAPQ8TBZ2 947 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 SLC35C1Q96A29 364 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 PCED1BQ96HM7 432 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 FUBP3Q96I24 572 aaKnown RBP eCLIP18.04■□□□□ 0.48
CD9-209ENST00000540891 ZSWIM3Q96MP5 696 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 GBP4Q96PP9 640 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 MED15Q96RN5 788 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 BCO2Q9BYV7 579 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 IL21Q9HBE4 155 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 TRIOO75962 3097 aa18.04■□□□□ 0.48
CD9-209ENST00000540891 A0A1W2PRU2 124 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 BICDL2A1A5D9 508 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 TMEM221A6NGB7 291 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 A8MXQ7 604 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 M0R296 226 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 HMGA1P17096 107 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms