RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CLCN1P35523 988 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 PRKCIP41743 596 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 NCOA4Q13772 614 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 RAPGEF1Q13905 1077 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
ATL3-204ENST00000540699 KIAA1841Q6NSI8 718 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 TMEM184AQ6ZMB5 413 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 ANKS3Q6ZW76 656 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 IRF2BP2Q7Z5L9 587 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 REXO1L1PQ8IX06 675 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 APPL2Q8NEU8 664 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 OLIG1Q8TAK6 271 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 SPATA18Q8TC71 538 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 MICAL1Q8TDZ2 1067 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 SLC22A17Q8WUG5 538 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 RIN2Q8WYP3 895 aaPredicted RBP11.32□□□□□ -0.6
ATL3-204ENST00000540699 HPDLQ96IR7 371 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 PPP1R13BQ96KQ4 1090 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 KREMEN1Q96MU8 473 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 KLHL5Q96PQ7 755 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 SPAG5Q96R06 1193 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 DESI2Q9BSY9 194 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 EMILIN2Q9BXX0 1053 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 TLE6Q9H808 572 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 NHEJ1Q9H9Q4 299 aaPredicted RBP11.32□□□□□ -0.6
ATL3-204ENST00000540699 PPP2R2CQ9Y2T4 447 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 REXO2Q9Y3B8 237 aaKnown RBP11.32□□□□□ -0.6
ATL3-204ENST00000540699 EPN1Q9Y6I3 576 aaPredicted RBP11.32□□□□□ -0.6
ATL3-204ENST00000540699 MUC6Q6W4X9 2439 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 PTPRDP23468 1912 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 EIF3CLB5ME19 914 aaKnown RBP11.31□□□□□ -0.6
ATL3-204ENST00000540699 C2CD2LO14523 706 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 TEX28O15482 410 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 CCP110O43303 1012 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 LCA5LO95447 670 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 ASS1P00966 412 aaKnown RBP11.31□□□□□ -0.6
ATL3-204ENST00000540699 KRT19P08727 400 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 FAM163BP0C2L3 166 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 ODC1P11926 461 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 IL9P15248 144 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 SOX5P35711 763 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 STAT1P42224 750 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 NRIP1P48552 1158 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 NDUFV1P49821 464 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 MYO1EQ12965 1108 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 ADAM15Q13444 863 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 DRAP1Q14919 205 aaPredicted RBP11.31□□□□□ -0.6
ATL3-204ENST00000540699 PSMD5Q16401 504 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 ASIC2Q16515 512 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 PTCRAQ6ISU1 281 aaPredicted RBP11.31□□□□□ -0.6
ATL3-204ENST00000540699 SLC8B1Q6J4K2 584 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 PRSS55Q6UWB4 352 aaPredicted RBP11.31□□□□□ -0.6
ATL3-204ENST00000540699 RSPO2Q6UXX9 243 aaPredicted RBP11.31□□□□□ -0.6
ATL3-204ENST00000540699 DSTYKQ6XUX3 929 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 NYAP1Q6ZVC0 841 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 DPH6Q7L8W6 267 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 ALYREFQ86V81 257 aaKnown RBP11.31□□□□□ -0.6
ATL3-204ENST00000540699 CEP57Q86XR8 500 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 TOP6BLQ8N6T0 577 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 ACRBPQ8NEB7 543 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 TAF4BQ92750 862 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 KAT5Q92993 513 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
ATL3-204ENST00000540699 NT5C1BQ96P26 610 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 EIF3CQ99613 913 aaKnown RBP11.31□□□□□ -0.6
ATL3-204ENST00000540699 CLSTN3Q9BQT9 956 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 OXCT2Q9BYC2 517 aaPredicted RBP11.31□□□□□ -0.6
ATL3-204ENST00000540699 APOBEC3GQ9HC16 384 aaKnown RBP11.31□□□□□ -0.6
ATL3-204ENST00000540699 DSEQ9UL01 958 aa11.31□□□□□ -0.6
ATL3-204ENST00000540699 C2orf16Q68DN1 1984 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 FAM86C2PA6NEL3 165 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 GRXCR2A6NFK2 248 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 PRR33A8MZF0 331 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 H3BQ06 376 aaPredicted RBP11.3□□□□□ -0.6
ATL3-204ENST00000540699 H7C4K7 107 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 CYB561D2O14569 222 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 ZNF263O14978 683 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 PER2O15055 1255 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 ZSCAN12O43309 604 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 PHACTR2O75167 634 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 CSPG5O95196 566 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 PAPLNO95428 1278 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 GLP2RO95838 553 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 ADH1AP07327 375 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 CCDC175P0C221 793 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 PNMA6AP0CW24 399 aaPredicted RBP11.3□□□□□ -0.6
ATL3-204ENST00000540699 FERP16591 822 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 GTF2F1P35269 517 aaKnown RBP eCLIP11.3□□□□□ -0.6
ATL3-204ENST00000540699 CYLC1P35663 651 aaPredicted RBP11.3□□□□□ -0.6
ATL3-204ENST00000540699 LTBRP36941 435 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 EIF4A3P38919 411 aaKnown RBP11.3□□□□□ -0.6
ATL3-204ENST00000540699 PIK3CAP42336 1068 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 CLCN4P51793 760 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 MYL6P60660 151 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 GCNT1Q02742 428 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 YWHAHQ04917 246 aaPredicted RBP11.3□□□□□ -0.6
ATL3-204ENST00000540699 BIRC3Q13489 604 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 TRPC3Q13507 836 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 RAB33AQ14088 237 aa11.3□□□□□ -0.6
ATL3-204ENST00000540699 PUS10Q3MIT2 529 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms