RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ANKMY2Q8IV38 441 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 UBR7Q8N806 425 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 SH3TC2Q8TF17 1288 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 NAF1Q96HR8 494 aaKnown RBP12.93□□□□□ -0.34
NPC1-202ENST00000540608 TLE6Q9H808 572 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 JPH1Q9HDC5 661 aaPredicted RBP12.93□□□□□ -0.34
NPC1-202ENST00000540608 RNF146Q9NTX7 359 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 ZMYND8Q9ULU4 1186 aaPredicted RBP12.93□□□□□ -0.34
NPC1-202ENST00000540608 SNCAIPQ9Y6H5 919 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 CLUHO75153 1309 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 CNTNAP2Q9UHC6 1331 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 IFNB1P01574 187 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 TPBGLP0DKB5 382 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 SP4Q02446 784 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 NCOA4Q13772 614 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 BLMHQ13867 455 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 MAPK6Q16659 721 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 MTERF2Q49AM1 385 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 XKR3Q5GH77 459 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 ZBTB41Q5SVQ8 909 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 FYB2Q5VWT5 728 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 ZNF449Q6P9G9 518 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 NLRP9Q7RTR0 991 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 ENDOVQ8N8Q3 282 aaKnown RBP12.93□□□□□ -0.34
NPC1-202ENST00000540608 NIPA2Q8N8Q9 360 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 OR5B17Q8NGF7 314 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 HAUS1Q96CS2 278 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 DHRS4Q9BTZ2 278 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 MSTO1Q9BUK6 570 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 SLC9A2Q9UBY0 812 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 LNPEPQ9UIQ6 1025 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 A0A0B4J269 797 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 LRRD1A4D1F6 860 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 K7ERI5 159 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 HNRNPCL1O60812 293 aaKnown RBP12.92□□□□□ -0.34
NPC1-202ENST00000540608 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
NPC1-202ENST00000540608 NEBLO76041 1014 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 RGS20O76081 388 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 CBX6O95503 412 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 GM2AP17900 193 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 PTPN4P29074 926 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 ACTR2P61160 394 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 EMC2Q15006 297 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 PPIL6Q8IXY8 311 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 ZNF276Q8N554 614 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 TEX9Q8N6V9 391 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 PYROXD1Q8WU10 500 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 ZFP69BQ9UJL9 534 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 GOLGA8SH3BPF8 625 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 GOLGA8MH3BSY2 632 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 BANF1O75531 89 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 GLRA2P23416 452 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 EPHB2P29323 1055 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 ARL4CP56559 192 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 TFDP1Q14186 410 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 CIAPIN1Q6FI81 312 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 ATP11CQ8NB49 1132 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 TMEM35BQ8NCS4 154 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 TMEM143Q96AN5 459 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 ACSF2Q96CM8 615 aaPredicted RBP12.92□□□□□ -0.34
NPC1-202ENST00000540608 NUDCD1Q96RS6 583 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 ADAM33Q9BZ11 813 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 FRMD8P1Q9BZ68 369 aaPredicted RBP12.92□□□□□ -0.34
NPC1-202ENST00000540608 ZNF518BQ9C0D4 1074 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 NPHS2Q9NP85 383 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 ANKFY1Q9P2R3 1169 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 EFR3BQ9Y2G0 817 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 DOCK5Q9H7D0 1870 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 C3orf70A6NLC5 250 aaPredicted RBP12.92□□□□□ -0.34
NPC1-202ENST00000540608 TM9SF1O15321 606 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 TROVE2P10155 538 aaKnown RBP eCLIP12.92□□□□□ -0.34
NPC1-202ENST00000540608 SSTR1P30872 391 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 NAMPTP43490 491 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 CTCFP49711 727 aaPredicted RBP12.92□□□□□ -0.34
NPC1-202ENST00000540608 RNASELQ05823 741 aaKnown RBP12.92□□□□□ -0.34
NPC1-202ENST00000540608 SEPT7Q16181 437 aaKnown RBP12.92□□□□□ -0.34
NPC1-202ENST00000540608 KLHL38Q2WGJ6 581 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 PLEKHG4Q58EX7 1191 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 FNBP1LQ5T0N5 605 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 C3orf62Q6ZUJ4 267 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 MTDHQ86UE4 582 aaKnown RBP12.92□□□□□ -0.34
NPC1-202ENST00000540608 NAT8LQ8N9F0 302 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 DEPTORQ8TB45 409 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 ASAP3Q8TDY4 903 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 MZB1Q8WU39 189 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 ALKBH8Q96BT7 664 aaKnown RBP12.92□□□□□ -0.34
NPC1-202ENST00000540608 TARS2Q9BW92 718 aaKnown RBP12.92□□□□□ -0.34
NPC1-202ENST00000540608 PORCNQ9H237 461 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 VPS11Q9H270 941 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 ACSS3Q9H6R3 686 aa12.92□□□□□ -0.34
NPC1-202ENST00000540608 CORO1CQ9ULV4 474 aaPredicted RBP12.92□□□□□ -0.34
NPC1-202ENST00000540608 ADGRA2Q96PE1 1338 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 ADRA1DP25100 572 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 RAD23BP54727 409 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 MSS51Q4VC12 460 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 SCARA3Q6AZY7 606 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 POLNQ7Z5Q5 900 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms