RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PALM3A6NDB9 673 aaPredicted RBP9.13□□□□□ -0.95
DDB1-217ENST00000540166 SLC37A4O43826 429 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 E2F6O75461 281 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 CCDC166P0CW27 439 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 GALNTL6Q49A17 601 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 PRR16Q569H4 304 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 PPP1R14CQ8TAE6 165 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 BADQ92934 168 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 NSL1Q96IY1 281 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 CDC42EP4Q9H3Q1 356 aaKnown RBP9.13□□□□□ -0.95
DDB1-217ENST00000540166 BLOC1S4Q9NUP1 217 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 ZNF212Q9UDV6 495 aa9.13□□□□□ -0.95
DDB1-217ENST00000540166 MIF4GDA9UHW6 222 aaKnown RBP9.12□□□□□ -0.95
DDB1-217ENST00000540166 VAV1P15498 845 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
DDB1-217ENST00000540166 ITGA7Q13683 1181 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 KBTBD12Q3ZCT8 623 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 KHDC1Q4VXA5 237 aaKnown RBP9.12□□□□□ -0.95
DDB1-217ENST00000540166 MORN1Q5T089 497 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 DUPD1Q68J44 220 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 ADGRF4Q8IZF3 695 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 SLC35G2Q8TBE7 412 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 GRK7Q8WTQ7 553 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 PPP2R3CQ969Q6 453 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 MKL1Q969V6 931 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.12□□□□□ -0.953e-7■■■■■ 105.9
DDB1-217ENST00000540166 GCNT4Q9P109 453 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 PHF24Q9UPV7 400 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 MYH6P13533 1939 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 ZBTB5O15062 677 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 DNAJC6O75061 913 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 NR3C2P08235 984 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 HOXC6P09630 235 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 CCNB1P14635 433 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 GNAZP19086 355 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 KCNJ1P48048 391 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 OCRLQ01968 901 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 CCDC15Q0P6D6 951 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 NR1H3Q13133 447 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 PSRC1Q6PGN9 363 aaPredicted RBP9.12□□□□□ -0.95
DDB1-217ENST00000540166 MYCT1Q8N699 235 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 SH3GLB1Q9Y371 365 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 CHMP2AO43633 222 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 ECHS1P30084 290 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 RPL21P46778 160 aaKnown RBP9.12□□□□□ -0.95
DDB1-217ENST00000540166 AP1B1Q10567 949 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 ASPHQ12797 758 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 LAMC2Q13753 1193 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 HGSNATQ68CP4 663 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 SLC39A5Q6ZMH5 540 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 OTOP2Q7RTS6 562 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 GLYCTKQ8IVS8 523 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 BORCS6Q96GS4 357 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 PNMA5Q96PV4 448 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 TMEM59LQ9UK28 342 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 UTRNP46939 3433 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 RBAK-RBAKDNI3L0D1 243 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 I3L4J1 428 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 DDX39AO00148 427 aaKnown RBP9.12□□□□□ -0.95
DDB1-217ENST00000540166 GGPS1O95749 300 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 MYBP10242 640 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 UCHL3P15374 230 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 MLH1P40692 756 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 CYP2J2P51589 502 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 RGS9BPQ6ZS82 235 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 MIER3Q7Z3K6 550 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 ZNF571Q7Z3V5 609 aaPredicted RBP9.12□□□□□ -0.95
DDB1-217ENST00000540166 KCNK18Q7Z418 384 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 ZNF554Q86TJ5 538 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 HIPK4Q8NE63 616 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 CFAP57Q96MR6 1250 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 BTBD10Q9BSF8 475 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 ANKFY1Q9P2R3 1169 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 OGDHLQ9ULD0 1010 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 FRMD4BQ9Y2L6 1034 aa9.12□□□□□ -0.95
DDB1-217ENST00000540166 COL2A1P02458 1487 aaPredicted RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 SFI1A8K8P3 1242 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 KIAA0391O15091 583 aaKnown RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 FOSL2P15408 326 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 GJC1P36383 396 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 TMED10P49755 219 aaKnown RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 ZBTB17Q13105 803 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 C4orf50Q6ZRC1 276 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 ASRGL1Q7L266 308 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 NT5DC3Q86UY8 548 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 STKLD1Q8NE28 680 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 MMTAG2Q9BU76 263 aaKnown RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 TRABDQ9H4I3 376 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 PAK6Q9NQU5 681 aaPredicted RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 ETNK2Q9NVF9 386 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 TSC22D4Q9Y3Q8 395 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 COL4A1P02462 1669 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 PNMA6FA0A0J9YX94 578 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 NFIBO00712 420 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 PENKP01210 267 aaPredicted RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 FGRP09769 529 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 RFX1P22670 979 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 DCTN2Q13561 401 aaKnown RBP9.11□□□□□ -0.95
DDB1-217ENST00000540166 STAT4Q14765 748 aa9.11□□□□□ -0.95
DDB1-217ENST00000540166 USP17L6PQ6QN14 398 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms