RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ARHGAP17Q68EM7 881 aa18.14■□□□□ 0.49
LTBR-207ENST00000539925 MRPL10Q7Z7H8 261 aaKnown RBP18.14■□□□□ 0.49
LTBR-207ENST00000539925 C12orf50Q8NA57 414 aaPredicted RBP18.14■□□□□ 0.49
LTBR-207ENST00000539925 CD99L2Q8TCZ2 262 aa18.14■□□□□ 0.49
LTBR-207ENST00000539925 C18orf25Q96B23 403 aaPredicted RBP18.14■□□□□ 0.49
LTBR-207ENST00000539925 PKNOX2Q96KN3 472 aa18.14■□□□□ 0.49
LTBR-207ENST00000539925 TNIP3Q96KP6 325 aa18.14■□□□□ 0.49
LTBR-207ENST00000539925 GLT1D1Q96MS3 346 aa18.14■□□□□ 0.49
LTBR-207ENST00000539925 TWNKQ96RR1 684 aa18.14■□□□□ 0.49
LTBR-207ENST00000539925 FAM129AQ9BZQ8 928 aa18.14■□□□□ 0.49
LTBR-207ENST00000539925 CYLDQ9NQC7 956 aa18.14■□□□□ 0.49
LTBR-207ENST00000539925 DDX56Q9NY93 547 aaKnown RBP18.14■□□□□ 0.49
LTBR-207ENST00000539925 PCYOX1Q9UHG3 505 aa18.14■□□□□ 0.49
LTBR-207ENST00000539925 BHMG1C9JSJ3 638 aaPredicted RBP18.13■□□□□ 0.49
LTBR-207ENST00000539925 HUS1O60921 280 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 GLI1P08151 1106 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 DESP17661 470 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 THPOP40225 353 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 TNNT3P45378 269 aaPredicted RBP18.13■□□□□ 0.49
LTBR-207ENST00000539925 PSMC1P62191 440 aaKnown RBP18.13■□□□□ 0.49
LTBR-207ENST00000539925 NFX1Q12986 1120 aaKnown RBP18.13■□□□□ 0.49
LTBR-207ENST00000539925 PDCLQ13371 301 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 GLRA4Q5JXX5 417 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 LIMS2Q7Z4I7 341 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 POLNQ7Z5Q5 900 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 ZDHHC17Q8IUH5 632 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 RCOR2Q8IZ40 523 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 CRYBG2Q8N1P7 616 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 APPL2Q8NEU8 664 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 SEC14L1Q92503 715 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 DDX27Q96GQ7 796 aaKnown RBP18.13■□□□□ 0.49
LTBR-207ENST00000539925 DDX47Q9H0S4 455 aaKnown RBP18.13■□□□□ 0.49
LTBR-207ENST00000539925 SNX25Q9H3E2 840 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 ERVK-5Q9HDB9 667 aa18.13■□□□□ 0.49
LTBR-207ENST00000539925 FAM170AA1A519 330 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 MARCKSL1P49006 195 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 ACLYP53396 1101 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 DRG2P55039 364 aaKnown RBP18.12■□□□□ 0.49
LTBR-207ENST00000539925 DR1Q01658 176 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 HADHQ16836 314 aaKnown RBP18.12■□□□□ 0.49
LTBR-207ENST00000539925 MAGOHBQ96A72 148 aaKnown RBP18.12■□□□□ 0.49
LTBR-207ENST00000539925 PGBD4Q96DM1 585 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 MCRS1Q96EZ8 462 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 MCEEQ96PE7 176 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 PPP1R10Q96QC0 940 aaKnown RBP18.12■□□□□ 0.49
LTBR-207ENST00000539925 SAGE1Q9NXZ1 904 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 HMGXB4Q9UGU5 601 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 A8MXQ7 604 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 FKTNO75072 461 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 ZMYND10O75800 440 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 SSTR3P32745 418 aaPredicted RBP18.12■□□□□ 0.49
LTBR-207ENST00000539925 RPL9P32969 192 aaKnown RBP18.12■□□□□ 0.49
LTBR-207ENST00000539925 SOWAHAQ2M3V2 549 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 C2CD6Q53TS8 623 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 ODF2Q5BJF6 829 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 SYDE1Q6ZW31 735 aaPredicted RBP18.12■□□□□ 0.49
LTBR-207ENST00000539925 XYLT1Q86Y38 959 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 ARRDC4Q8NCT1 418 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 OR6B3Q8NGW1 331 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 SPATA18Q8TC71 538 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 TRIM7Q9C029 511 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 RNF39Q9H2S5 420 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 LRRC19Q9H756 370 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 HMX1Q9NP08 348 aaPredicted RBP18.12■□□□□ 0.49
LTBR-207ENST00000539925 KLK14Q9P0G3 267 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 AMACRQ9UHK6 382 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 TSPAN16Q9UKR8 245 aa18.12■□□□□ 0.49
LTBR-207ENST00000539925 SASH3O75995 380 aa18.11■□□□□ 0.49
LTBR-207ENST00000539925 THP07101 528 aa18.11■□□□□ 0.49
LTBR-207ENST00000539925 KRT7P08729 469 aa18.11■□□□□ 0.49
LTBR-207ENST00000539925 CTSHP09668 335 aa18.11■□□□□ 0.49
LTBR-207ENST00000539925 WARSP23381 471 aaKnown RBP18.11■□□□□ 0.49
LTBR-207ENST00000539925 GNL1P36915 607 aaPredicted RBP18.11■□□□□ 0.49
LTBR-207ENST00000539925 HSP90B2PQ58FF3 399 aa18.11■□□□□ 0.49
LTBR-207ENST00000539925 PHLDB2Q86SQ0 1253 aa18.11■□□□□ 0.49
LTBR-207ENST00000539925 GRK7Q8WTQ7 553 aa18.11■□□□□ 0.49
LTBR-207ENST00000539925 SLCO2A1Q92959 643 aa18.11■□□□□ 0.49
LTBR-207ENST00000539925 CPXM1Q96SM3 734 aa18.11■□□□□ 0.49
LTBR-207ENST00000539925 MRPL45Q9BRJ2 306 aaKnown RBP18.11■□□□□ 0.49
LTBR-207ENST00000539925 MED4Q9NPJ6 270 aa18.11■□□□□ 0.49
LTBR-207ENST00000539925 PDCD11Q14690 1871 aaKnown RBP18.11■□□□□ 0.49
LTBR-207ENST00000539925 MYCNP04198 464 aaPredicted RBP18.1■□□□□ 0.49
LTBR-207ENST00000539925 PTPN7P35236 360 aa18.1■□□□□ 0.49
LTBR-207ENST00000539925 SCNN1AP37088 669 aa18.1■□□□□ 0.49
LTBR-207ENST00000539925 RPL7AP62424 266 aaKnown RBP18.1■□□□□ 0.49
LTBR-207ENST00000539925 SMC1AQ14683 1233 aaKnown RBP18.1■□□□□ 0.49
LTBR-207ENST00000539925 GOLGA7BQ2TAP0 167 aa18.1■□□□□ 0.49
LTBR-207ENST00000539925 TMEM86AQ8N2M4 240 aa18.1■□□□□ 0.49
LTBR-207ENST00000539925 MREGQ8N565 214 aa18.1■□□□□ 0.49
LTBR-207ENST00000539925 PRELID2Q8N945 189 aa18.1■□□□□ 0.49
LTBR-207ENST00000539925 EFR3BQ9Y2G0 817 aa18.1■□□□□ 0.49
LTBR-207ENST00000539925 GRIN2DO15399 1336 aa18.1■□□□□ 0.49
LTBR-207ENST00000539925 ARHGEF37A1IGU5 675 aa18.09■□□□□ 0.49
LTBR-207ENST00000539925 PTGESO14684 152 aa18.09■□□□□ 0.49
LTBR-207ENST00000539925 PPEF2O14830 753 aa18.09■□□□□ 0.49
LTBR-207ENST00000539925 RNF8O76064 485 aa18.09■□□□□ 0.49
LTBR-207ENST00000539925 PSMA2P25787 234 aa18.09■□□□□ 0.49
LTBR-207ENST00000539925 SSR1P43307 286 aaKnown RBP18.09■□□□□ 0.49
LTBR-207ENST00000539925 ACADSBP45954 432 aa18.09■□□□□ 0.49
LTBR-207ENST00000539925 BCAT1P54687 386 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms