RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 ODF2Q5BJF6 829 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 C11orf63Q6NUN7 778 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 DNAJC24Q6P3W2 148 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 DCUN1D2Q6PH85 259 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 NYAP1Q6ZVC0 841 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 C7orf61Q8IZ16 206 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 FIBCD1Q8N539 461 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 ACRBPQ8NEB7 543 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 MYCBPAPQ8TBZ2 947 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 LINC01599Q8WXQ3 324 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 HERVK_113Q902F9 699 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 DDX1Q92499 740 aaKnown RBP12.48□□□□□ -0.41
VTN-202ENST00000539746 KAT5Q92993 513 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 TRIM43Q96BQ3 446 aaPredicted RBP12.48□□□□□ -0.41
VTN-202ENST00000539746 C18orf8Q96DM3 657 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 CYFIP2Q96F07 1278 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 RPGRIP1Q96KN7 1286 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 C16orf45Q96MC5 204 aaPredicted RBP12.48□□□□□ -0.41
VTN-202ENST00000539746 RAD9AQ99638 391 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 NAPGQ99747 312 aaPredicted RBP12.48□□□□□ -0.41
VTN-202ENST00000539746 MED10Q9BTT4 135 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 TTPALQ9BTX7 342 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 SELENOOQ9BVL4 669 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.48□□□□□ -0.41
VTN-202ENST00000539746 RRN3Q9NYV6 651 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 SPG21Q9NZD8 308 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 POLIQ9UNA4 740 aa12.48□□□□□ -0.41
VTN-202ENST00000539746 O00370 1275 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 NRP1O14786 923 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 XPO1O14980 1071 aaKnown RBP12.47□□□□□ -0.41
VTN-202ENST00000539746 TRIM66O15016 1216 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 MEFVO15553 781 aaPredicted RBP12.47□□□□□ -0.41
VTN-202ENST00000539746 MTA2O94776 668 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 CYP1A2P05177 515 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 GLI1P08151 1106 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 PLEKP08567 350 aaPredicted RBP12.47□□□□□ -0.41
VTN-202ENST00000539746 PRLRP16471 622 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 GUCY2FP51841 1108 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 GALCP54803 685 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 NOMO3P69849 1222 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 UBE3AQ05086 875 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 SOX4Q06945 474 aaPredicted RBP12.47□□□□□ -0.41
VTN-202ENST00000539746 CKAP4Q07065 602 aaKnown RBP12.47□□□□□ -0.41
VTN-202ENST00000539746 MTF1Q14872 753 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 INTS6LQ5JSJ4 861 aaKnown RBP12.47□□□□□ -0.41
VTN-202ENST00000539746 NAA35Q5VZE5 725 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 PDE12Q6L8Q7 609 aaKnown RBP12.47□□□□□ -0.41
VTN-202ENST00000539746 CCDC70Q6NSX1 233 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 VSTM1Q6UX27 236 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 RTL10Q7L3V2 364 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 ARCQ7LC44 396 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 SPATA2LQ8IUW3 424 aaPredicted RBP12.47□□□□□ -0.41
VTN-202ENST00000539746 REXO1L1PQ8IX06 675 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 MCOLN2Q8IZK6 566 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 CRIPAKQ8N1N5 446 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 ARHGAP18Q8N392 663 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 C3orf20Q8ND61 904 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 SPPL2BQ8TCT7 592 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 COMMD8Q9NX08 183 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 CNOT8Q9UFF9 292 aaKnown RBP12.47□□□□□ -0.41
VTN-202ENST00000539746 IP6K2Q9UHH9 426 aa12.47□□□□□ -0.41
VTN-202ENST00000539746 MACROD2A1Z1Q3 448 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 CES2O00748 559 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 ZNF189O75820 626 aaPredicted RBP12.46□□□□□ -0.41
VTN-202ENST00000539746 UPP2O95045 317 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 URODP06132 367 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 GALTP07902 379 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 NPR3P17342 541 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 BRD2P25440 801 aaKnown RBP12.46□□□□□ -0.41
VTN-202ENST00000539746 MAN1A1P33908 653 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 MAGEA11P43364 429 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 CDH8P55286 799 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 BCAR1P56945 870 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 RPL10AP62906 217 aaKnown RBP12.46□□□□□ -0.41
VTN-202ENST00000539746 PLD1Q13393 1074 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 PIGHQ14442 188 aaPredicted RBP12.46□□□□□ -0.41
VTN-202ENST00000539746 PPP2R5EQ16537 467 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 GOLGA7BQ2TAP0 167 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 CFAP221Q4G0U5 840 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 EFHC1Q5JVL4 640 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 ZNF569Q5MCW4 686 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 ACBD5Q5T8D3 534 aaPredicted RBP12.46□□□□□ -0.41
VTN-202ENST00000539746 WSCD1Q658N2 575 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 DAAM2Q86T65 1068 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 TADA2BQ86TJ2 420 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 ACOT1Q86TX2 421 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 SIX6OS1Q8N1H7 587 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 FNIP1Q8TF40 1166 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 SLC20A1Q8WUM9 679 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 KBTBD7Q8WVZ9 684 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 DUSP16Q9BY84 665 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 NRDE2Q9H7Z3 1164 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 GOLGA2P5Q9HBQ8 144 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 LRRC4Q9HBW1 653 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 DMAP1Q9NPF5 467 aaPredicted RBP12.46□□□□□ -0.41
VTN-202ENST00000539746 RRAGDQ9NQL2 400 aaPredicted RBP12.46□□□□□ -0.41
VTN-202ENST00000539746 AJAP1Q9UKB5 411 aaPredicted RBP12.46□□□□□ -0.41
VTN-202ENST00000539746 TSPAN16Q9UKR8 245 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 AMFRQ9UKV5 643 aa12.46□□□□□ -0.41
VTN-202ENST00000539746 LZTS1Q9Y250 596 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms