RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	LRRC1	Q9BTT6	524 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	YIPF3	Q9GZM5	350 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	MLXIPL	Q9NP71	852 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	DRG1	Q9Y295	367 aa	Known RBP	9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	DTNA	Q9Y4J8	743 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	KANSL1L	A0AUZ9	987 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	DYRK3	O43781	588 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	GLRA3	O75311	464 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	MYB	P10242	640 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	C4BPB	P20851	252 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CACNB2	Q08289	660 aa	Predicted RBP	9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	BAAT	Q14032	418 aa	Predicted RBP	9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CCDC85B	Q15834	202 aa	Predicted RBP	9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	MOXD1	Q6UVY6	613 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	THAP11	Q96EK4	314 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	GJD4	Q96KN9	370 aa	Predicted RBP	9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	UTP6	Q9NYH9	597 aa	Known RBP	9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ESYT3	A0FGR9	886 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	NR3C2	P08235	984 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SOAT1	P35610	550 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	MRPS25	P82663	173 aa	Known RBP	9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	POU4F1	Q01851	419 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SCARF1	Q14162	830 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	BOLA3	Q53S33	107 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PLA2G4F	Q68DD2	849 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ACAD10	Q6JQN1	1059 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	EFCAB12	Q6NXP0	572 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	EME1	Q96AY2	570 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	C19orf60	Q96EN9	201 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	NSL1	Q96IY1	281 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ZNF518B	Q9C0D4	1074 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CPVL	Q9H3G5	476 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	LATS2	Q9NRM7	1088 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	METTL5	Q9NRN9	209 aa	Known RBP	9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TRMT6	Q9UJA5	497 aa	Known RBP	9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	IPP	Q9Y573	584 aa		9.37	□□□□□ -0.91
ECHDC2-222	ENST00000539680	FAM196B	A6NMK8	535 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	MYC	P01106	439 aa	Predicted RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	IFNA14	P01570	189 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	STIP1	P31948	543 aa	Known RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	RXRG	P48443	463 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	GTF2A2	P52657	109 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PURA	Q00577	322 aa	Known RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	KDSR	Q06136	332 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	NFIX	Q14938	502 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TRIP4	Q15650	581 aa	Predicted RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	MGAT5B	Q3V5L5	792 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ZRANB3	Q5FWF4	1079 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	BTNL9	Q6UXG8	535 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ATG9A	Q7Z3C6	839 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ZNF438	Q7Z4V0	828 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	RNF180	Q86T96	592 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	JAML	Q86YT9	394 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	NUP93	Q8N1F7	819 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	RFWD2	Q8NHY2	731 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	USP33	Q8TEY7	942 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	UCMA	Q8WVF2	138 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	OSBPL8	Q9BZF1	889 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680		M0R3G1	203 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	KPNA6	O60684	536 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	VCAM1	P19320	739 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	RGS7	P49802	495 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	STX5	Q13190	355 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	POLD3	Q15054	466 aa	Predicted RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	RSPH1	Q8WYR4	309 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	E2F7	Q96AV8	911 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PABPC5	Q96DU9	382 aa	Known RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SH3GL3	Q99963	347 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TSEN34	Q9BSV6	310 aa	Known RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PRRG3	Q9BZD7	231 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CRLS1	Q9UJA2	301 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TOMM70	O94826	608 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	NPTXR	O95502	500 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PTGER2	P43116	358 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TGM3	Q08188	693 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ZNF177	Q13360	481 aa	Predicted RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	MRNIP	Q6NTE8	343 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	DDX42	Q86XP3	938 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	TRIM48	Q8IWZ4	208 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	SCUBE2	Q9NQ36	999 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	POLE3	Q9NRF9	147 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	DDX28	Q9NUL7	540 aa	Known RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	DPP3	Q9NY33	737 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CNOT7	Q9UIV1	285 aa	Known RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	PRR12	Q9ULL5	1215 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	NDUFB10	O96000	172 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	RPA1	P27694	616 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	RRM2	P31350	389 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	COIL	P38432	576 aa	Predicted RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ACOT2	P49753	483 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	VPS72	Q15906	364 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	LONRF1	Q17RB8	773 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ZNF544	Q6NX49	715 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	CDC42EP5	Q6NZY7	148 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	NUDT12	Q9BQG2	462 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	DYNC1LI2	O43237	492 aa	Predicted RBP	9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	F9	P00740	461 aa		9.36	□□□□□ -0.91
ECHDC2-222	ENST00000539680	ALOX15	P16050	662 aa	Predicted RBP	9.36	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms