RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CTC1Q2NKJ3 1217 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 TBC1D10BQ4KMP7 808 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 C2CD6Q53TS8 623 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 PPP1R15BQ5SWA1 713 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 DAB2IPQ5VWQ8 1189 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 CDCA2Q69YH5 1023 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 LLGL2Q6P1M3 1020 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 APBB1IPQ7Z5R6 666 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 PASD1Q8IV76 773 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 PDIK1LQ8N165 341 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 NAT8LQ8N9F0 302 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 BANPQ8N9N5 519 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 FAM118BQ9BPY3 351 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 GLIS2Q9BZE0 524 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 TMEM134Q9H6X4 195 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 MANSC1Q9H8J5 431 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 PSME4Q14997 1843 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 CCDC189A1A4V9 331 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 CALCAP01258 141 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 ATP5BP06576 529 aaKnown RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 NR3C2P08235 984 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 ZSCAN5DPP0CG00 497 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 KCNA2P16389 499 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 GPX6P59796 221 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 RPL7AP62424 266 aaKnown RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 NCOA4Q13772 614 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 SURF1Q15526 300 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 SGSM1Q2NKQ1 1148 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 C3orf62Q6ZUJ4 267 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 PRUNE1Q86TP1 453 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 ARHGAP24Q8N264 748 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 GLIS1Q8NBF1 620 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 CYTH2Q99418 400 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 BTBD10Q9BSF8 475 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 FRMD8Q9BZ67 464 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 KIF9Q9HAQ2 790 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 JPH1Q9HDC5 661 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 SEPT9Q9UHD8 586 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 PGAP2Q9UHJ9 254 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 A0A0B4J269 797 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 A0A1W2PPM1 405 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 PI4K2BG5E9Z4 385 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 K7ERI5 159 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 KLF11O14901 512 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 GLRA2P23416 452 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 CTCFP49711 727 aaPredicted RBP13.92□□□□□ -0.18
UBE3B-209ENST00000539584 OAZ1P54368 228 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 ACAP1Q15027 740 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 TAZQ16635 292 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 MEX3CQ5U5Q3 659 aaKnown RBP13.92□□□□□ -0.18
UBE3B-209ENST00000539584 SPOPLQ6IQ16 392 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 SWSAP1Q6NVH7 229 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 ABHD15Q6UXT9 468 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 BBS12Q6ZW61 710 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 PALM2Q8IXS6 379 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 ZNF276Q8N554 614 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 NSUN6Q8TEA1 469 aaKnown RBP13.92□□□□□ -0.18
UBE3B-209ENST00000539584 MZB1Q8WU39 189 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 SPOCK2Q92563 424 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 MCEEQ96PE7 176 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 PAFAH2Q99487 392 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 PORCNQ9H237 461 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 VPS33BQ9H267 617 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 SLC9A2Q9UBY0 812 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 NKX1-2Q9UD57 310 aaPredicted RBP13.92□□□□□ -0.18
UBE3B-209ENST00000539584 ZNRF3Q9ULT6 936 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 NUB1Q9Y5A7 615 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 CLUHO75153 1309 aa13.92□□□□□ -0.18
UBE3B-209ENST00000539584 LRRD1A4D1F6 860 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 HGSO14964 777 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-209ENST00000539584 PLSCR1O15162 318 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 HAUS5O94927 633 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 ASS1P00966 412 aaKnown RBP13.91□□□□□ -0.18
UBE3B-209ENST00000539584 CFHP08603 1231 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 WEE2P0C1S8 567 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 DHRS4L1P0CG22 281 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 EPHB2P29323 1055 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 PCK1P35558 622 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 YWHAEP62258 255 aaKnown RBP13.91□□□□□ -0.18
UBE3B-209ENST00000539584 PRKCEQ02156 737 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 ZNF252P-AS1Q0IIN9 211 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 GNPTABQ3T906 1256 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 ATP13A4Q4VNC1 1196 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 ZNF449Q6P9G9 518 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 MTDHQ86UE4 582 aaKnown RBP13.91□□□□□ -0.18
UBE3B-209ENST00000539584 WDR49Q8IV35 697 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 TRIM42Q8IWZ5 723 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 DEPTORQ8TB45 409 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 RSAD2Q8WXG1 361 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 CPT1BQ92523 772 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 NSL1Q96IY1 281 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 TMEM121Q9BTD3 319 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 MSTO1Q9BUK6 570 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 TMEM39BQ9GZU3 492 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 DENND2DQ9H6A0 471 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-209ENST00000539584 NPHS2Q9NP85 383 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 WDR35Q9P2L0 1181 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-209ENST00000539584 AGTPBP1Q9UPW5 1226 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms