RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ZNF132P52740 706 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 RAD23BP54727 409 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 ARPP19P56211 112 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 GCNT1Q02742 428 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 SYCP1Q15431 976 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 KLHDC7AQ5VTJ3 777 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 PDXDC1Q6P996 788 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 SYCE2Q6PIF2 218 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 DRC7Q8IY82 874 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 C12orf29Q8N999 325 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 SLC4A11Q8NBS3 891 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 ATAD1Q8NBU5 361 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 OR6B3Q8NGW1 331 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 ZNF461Q8TAF7 563 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 MSLNLQ96KJ4 702 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 NT5C1BQ96P26 610 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 ERGIC2Q96RQ1 377 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 SYT15Q9BQS2 421 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 EMILIN2Q9BXX0 1053 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 XPO4Q9C0E2 1151 aaKnown RBP13.87□□□□□ -0.19
CCDC42-202ENST00000539522 CYP3A43Q9HB55 503 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 APEX2Q9UBZ4 518 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 CNTN6Q9UQ52 1028 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 SSX2IPQ9Y2D8 614 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 FHOD1Q9Y613 1164 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 GOLGA6L6A8MZA4 724 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 RFPL2O75678 378 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 SOAT2O75908 522 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 ADH1AP07327 375 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 ATF2P15336 505 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 SLC39A12Q504Y0 691 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 WDR44Q5JSH3 913 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 ACOT1Q86TX2 421 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 METTL23Q86XA0 190 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 CRYBG2Q8N1P7 616 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 PPM1KQ8N3J5 372 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 C12orf76Q8N812 135 aaPredicted RBP13.86□□□□□ -0.19
CCDC42-202ENST00000539522 PPM1EQ8WY54 764 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 CDCA3Q99618 268 aaPredicted RBP13.86□□□□□ -0.19
CCDC42-202ENST00000539522 LSM14BQ9BX40 385 aaKnown RBP13.86□□□□□ -0.19
CCDC42-202ENST00000539522 B3GNT5Q9BYG0 378 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 S1PR5Q9H228 398 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 UBE2TQ9NPD8 197 aaPredicted RBP13.86□□□□□ -0.19
CCDC42-202ENST00000539522 ACP6Q9NPH0 428 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 PLCB1Q9NQ66 1216 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 MAN1C1Q9NR34 630 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 CDH9Q9ULB4 789 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 OBSL1O75147 1896 aa13.86□□□□□ -0.19
CCDC42-202ENST00000539522 A8MXQ7 604 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 CLDN5O00501 218 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 C1RP00736 705 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 PTPN1P18031 435 aaKnown RBP13.85□□□□□ -0.19
CCDC42-202ENST00000539522 GPR15P49685 360 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 CREMQ03060 361 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 UBXN1Q04323 297 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 ADCY1Q08828 1119 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 ZNF394Q53GI3 561 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 MDH1BQ5I0G3 518 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 UNC93AQ86WB7 457 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 FUKQ8N0W3 1084 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 B3GALNT2Q8NCR0 500 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 KREMEN2Q8NCW0 462 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 MAFAQ8NHW3 353 aaPredicted RBP13.85□□□□□ -0.19
CCDC42-202ENST00000539522 TFAP2BQ92481 460 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 SHC3Q92529 594 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 MYLPFQ96A32 169 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 ZNF707Q96C28 371 aaPredicted RBP13.85□□□□□ -0.19
CCDC42-202ENST00000539522 PABPC5Q96DU9 382 aaKnown RBP13.85□□□□□ -0.19
CCDC42-202ENST00000539522 PCED1BQ96HM7 432 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 IMPG2Q9BZV3 1241 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 TTYH3Q9C0H2 523 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 SNX25Q9H3E2 840 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 AFF4Q9UHB7 1163 aaKnown RBP13.85□□□□□ -0.19
CCDC42-202ENST00000539522 DNAJC12Q9UKB3 198 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 SLC27A5Q9Y2P5 690 aa13.85□□□□□ -0.19
CCDC42-202ENST00000539522 R3HCC1Q9Y3T6 440 aaKnown RBP13.85□□□□□ -0.19
CCDC42-202ENST00000539522 PES1O00541 588 aaKnown RBP13.84□□□□□ -0.19
CCDC42-202ENST00000539522 GLUD1P00367 558 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 P4HA1P13674 534 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 CCDC130P13994 396 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 CPB1P15086 417 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 UCHL3P15374 230 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 ATF6P18850 670 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 CYP2F1P24903 491 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 JAM2P57087 298 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 DUSP4Q13115 394 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 TPGS2Q68CL5 300 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 ANKRD54Q6NXT1 300 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 POTEHQ6S545 545 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 TCEAL8Q8IYN2 117 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 THEM5Q8N1Q8 247 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 STKLD1Q8NE28 680 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 ZMIZ2Q8NF64 920 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 OLIG1Q8TAK6 271 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 MYCBPAPQ8TBZ2 947 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 OXCT2Q9BYC2 517 aaPredicted RBP13.84□□□□□ -0.19
CCDC42-202ENST00000539522 ZNF518BQ9C0D4 1074 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 CLDND1Q9NY35 253 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 IMPACTQ9P2X3 320 aa13.84□□□□□ -0.19
CCDC42-202ENST00000539522 VCANP13611 3396 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms