RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 TLR3O15455 904 aaKnown RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 ALADP13716 330 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 RFC5P40937 340 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 OGDHQ02218 1023 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 GRIK3Q13003 919 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 PHF13Q86YI8 300 aaPredicted RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 UBR7Q8N806 425 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 DEPTORQ8TB45 409 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 SERPINB12Q96P63 405 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 OSBPL8Q9BZF1 889 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 AS3MTQ9HBK9 375 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 DLGAP2Q9P1A6 1054 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 SAE1Q9UBE0 346 aaPredicted RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 A0A0G2JND7 137 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 CFAP69A5D8W1 941 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 PEX11AO75192 247 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 ATF7P17544 494 aaPredicted RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 KLRC2P26717 231 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 NCOA4Q13772 614 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 MTFR1Q15390 333 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 TARBP2Q15633 366 aaKnown RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 TMEM154Q6P9G4 183 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 CCHCR1Q8TD31 782 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 ZNF606Q8WXB4 792 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 CDHR1Q96JP9 859 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 CGRRF1Q99675 332 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 DENND2DQ9H6A0 471 aaPredicted RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 SPATS2LQ9NUQ6 558 aaKnown RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 ZFATQ9P243 1243 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 T-ENOLP0DO92 83 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 UBA1P22314 1058 aaKnown RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 PTDSS1P48651 473 aaKnown RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 ZNF132P52740 706 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 INHBEP58166 350 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 BPIFB4P59827 614 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 TGFB2P61812 414 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 KHDC1Q4VXA5 237 aaKnown RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 ZNF394Q53GI3 561 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 TREML2Q5T2D2 321 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 DCAF15Q66K64 600 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 CDCA2Q69YH5 1023 aaPredicted RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 ARHGEF18Q6ZSZ5 1173 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 RHOT1Q8IXI2 618 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 KATNAL2Q8IYT4 538 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 PLVAPQ9BX97 442 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 NIFKQ9BYG3 293 aaKnown RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 ROPN1BQ9BZX4 212 aaPredicted RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 ROPN1Q9HAT0 212 aaPredicted RBP13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 AFG3L2Q9Y4W6 797 aa13.24□□□□□ -0.29
SFSWAP-208ENST00000539506 SIP14410 1827 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 TCRBV5S1A1TA0A578 114 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 F8VP50 259 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 PLCB3Q01970 1234 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 BLMHQ13867 455 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 STXBP2Q15833 593 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 CCNG2Q16589 344 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 ISLR2Q6UXK2 745 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 DSTYKQ6XUX3 929 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 ZBTB33Q86T24 672 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 WDTC1Q8N5D0 677 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 KCNN1Q92952 543 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 PSTPIP1O43586 416 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 FARP2O94887 1054 aaPredicted RBP13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 GNAT1P11488 350 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 MMP8P22894 467 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 ICAM3P32942 547 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 POLE2P56282 527 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 IL9RQ01113 521 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 CCDC6Q16204 474 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 MUM1Q2TAK8 710 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 PHC3Q8NDX5 983 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 TRIM11Q96F44 468 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 MAGEB18Q96M61 343 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 TRAIPQ9BWF2 469 aa13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.23□□□□□ -0.29
SFSWAP-208ENST00000539506 A0A1B0GVG6 124 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 H0YCG3 227 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 FZD9O00144 591 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 TPBGLP0DKB5 382 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 MAGEA4P43358 317 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 NRLP54845 237 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 DYNLT1P63172 113 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 PLEKHG4Q58EX7 1191 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 FEZF2Q8TBJ5 459 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 MTMR12Q9C0I1 747 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 TRABDQ9H4I3 376 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 BTBD7Q9P203 1132 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 PPP1R1BQ9UD71 204 aaPredicted RBP13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 DNPEPQ9ULA0 475 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 IVNS1ABPQ9Y6Y0 642 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 TMEM191CA6NGB0 347 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 FAM47DPA6NHR8 397 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 C19orf81C9J6K1 198 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 STAM2O75886 525 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 TMEM191BP0C7N4 346 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 MYL6P60660 151 aa13.22□□□□□ -0.29
SFSWAP-208ENST00000539506 NFX1Q12986 1120 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms