RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 ITFG1Q8TB96 612 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 MYLPFQ96A32 169 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 SEPT5Q99719 369 aaPredicted RBP16.83■□□□□ 0.28
RPAIN-206ENST00000539417 CDH9Q9ULB4 789 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 FAM50BQ9Y247 325 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 CLUHO75153 1309 aa16.83■□□□□ 0.28
RPAIN-206ENST00000539417 A8MXQ7 604 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 GNA14O95837 355 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 LRG1P02750 347 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 HAPLN1P10915 354 aaPredicted RBP16.82■□□□□ 0.28
RPAIN-206ENST00000539417 PCSK1P29120 753 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 CCR2P41597 374 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 CACNA2D1P54289 1103 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 STX1AQ16623 288 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 MGAT5BQ3V5L5 792 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 MDH1BQ5I0G3 518 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 WHAMMQ8TF30 809 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 NECTIN4Q96NY8 510 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 MYADMQ96S97 322 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 NIF3L1Q9GZT8 377 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 THAP9Q9H5L6 903 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 TMEM30AQ9NV96 361 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 DACH1Q9UI36 760 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 NFE2L3Q9Y4A8 694 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 PCDHB5Q9Y5E4 795 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.82■□□□□ 0.28
RPAIN-206ENST00000539417 TRIOO75962 3097 aa16.82■□□□□ 0.28
RPAIN-206ENST00000539417 CLDN5O00501 218 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 AFPP02771 609 aaKnown RBP16.81■□□□□ 0.28
RPAIN-206ENST00000539417 FAM163BP0C2L3 166 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 CCDC192P0DO97 292 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 PTPN1P18031 435 aaKnown RBP16.81■□□□□ 0.28
RPAIN-206ENST00000539417 CD58P19256 250 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 NDST1P52848 882 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 APBA1Q02410 837 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 TPD52L1Q16890 204 aaPredicted RBP16.81■□□□□ 0.28
RPAIN-206ENST00000539417 ACOT1Q86TX2 421 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 ENOX1Q8TC92 643 aaKnown RBP16.81■□□□□ 0.28
RPAIN-206ENST00000539417 GIPC2Q8TF65 315 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 KAT5Q92993 513 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 TCEAL4Q96EI5 215 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 PCED1BQ96HM7 432 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 CORO1BQ9BR76 489 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 FUCA2Q9BTY2 467 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 LRRC3Q9BY71 257 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 B3GNT5Q9BYG0 378 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 ZNF334Q9HCZ1 680 aaPredicted RBP16.81■□□□□ 0.28
RPAIN-206ENST00000539417 ANO10Q9NW15 660 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 PRKAG3Q9UGI9 489 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 MAFFQ9ULX9 164 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 PTPRDP23468 1912 aa16.81■□□□□ 0.28
RPAIN-206ENST00000539417 XYLBO75191 536 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 MOSPD3O75425 235 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 FGFR1OPO95684 399 aaKnown RBP16.8■□□□□ 0.28
RPAIN-206ENST00000539417 RHOP08100 348 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 POU2F2P09086 479 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 GJA1P17302 382 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 DDR2Q16832 855 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 CYP26C1Q6V0L0 522 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 PAQR9Q6ZVX9 377 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 RTL10Q7L3V2 364 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 GET4Q7L5D6 327 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-206ENST00000539417 ARHGEF19Q8IW93 802 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 GJD3Q8N144 294 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 B3GALNT2Q8NCR0 500 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 MYCBPAPQ8TBZ2 947 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 SPPL2BQ8TCT7 592 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 IMPG2Q9BZV3 1241 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 ELOVL4Q9GZR5 314 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 BDP1A6H8Y1 2624 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 TTC28Q96AY4 2481 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 SYCE3A1L190 88 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 PMM2O15305 246 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 P4HA1P13674 534 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 BDNFP23560 247 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 MTIF2P46199 727 aaKnown RBP16.8■□□□□ 0.28
RPAIN-206ENST00000539417 CYP27A1Q02318 531 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 INCA1Q0VD86 236 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 MTMR3Q13615 1198 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 NCAPHQ15003 741 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 NFE2Q16621 373 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-206ENST00000539417 PABPC1LQ4VXU2 614 aaKnown RBP16.8■□□□□ 0.28
RPAIN-206ENST00000539417 MIIPQ5JXC2 388 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 PRSS36Q5K4E3 855 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 TMC8Q8IU68 726 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 C12orf29Q8N999 325 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 C2orf15Q8WU43 125 aaKnown RBP16.8■□□□□ 0.28
RPAIN-206ENST00000539417 ING5Q8WYH8 240 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 CRACR2AQ9BSW2 395 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 ZNF518BQ9C0D4 1074 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 HSD3B7Q9H2F3 369 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 FANCLQ9NW38 375 aa16.8■□□□□ 0.28
RPAIN-206ENST00000539417 DOCK8Q8NF50 2099 aa16.79■□□□□ 0.28
RPAIN-206ENST00000539417 KCNJ18B7U540 433 aa16.79■□□□□ 0.28
RPAIN-206ENST00000539417 CILPO75339 1184 aa16.79■□□□□ 0.28
RPAIN-206ENST00000539417 PTPN2P17706 415 aa16.79■□□□□ 0.28
RPAIN-206ENST00000539417 FSHRP23945 695 aa16.79■□□□□ 0.28
RPAIN-206ENST00000539417 SSTR3P32745 418 aaPredicted RBP16.79■□□□□ 0.28
RPAIN-206ENST00000539417 KCNJ12Q14500 433 aa16.79■□□□□ 0.28
RPAIN-206ENST00000539417 CFAP221Q4G0U5 840 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms