RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TMCO5BA8MYB1 307 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 C9IYK1 514 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 BUB1BO60566 1050 aaPredicted RBP9.38□□□□□ -0.91
DDB1-213ENST00000539332 CILPO75339 1184 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 LSM8O95777 96 aaKnown RBP9.38□□□□□ -0.91
DDB1-213ENST00000539332 SYF2O95926 243 aaKnown RBP9.38□□□□□ -0.91
DDB1-213ENST00000539332 FTCDO95954 541 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 CALCAP01258 141 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 PAEPP09466 180 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 MYBL1P10243 752 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 SKIP12755 728 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 ITGA4P13612 1032 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 ITGB8P26012 769 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 SKIV2LQ15477 1246 aaKnown RBP9.38□□□□□ -0.91
DDB1-213ENST00000539332 GLRA4Q5JXX5 417 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 AGMOQ6ZNB7 445 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 MICALCLQ6ZW33 695 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 SLC24A5Q71RS6 500 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 MON1BQ7L1V2 547 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 ZNF598Q86UK7 904 aaKnown RBP9.38□□□□□ -0.91
DDB1-213ENST00000539332 NT5DC3Q86UY8 548 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 ECHDC2Q86YB7 292 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 PHF13Q86YI8 300 aaPredicted RBP9.38□□□□□ -0.91
DDB1-213ENST00000539332 MICALL1Q8N3F8 863 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 TMEM130Q8N3G9 435 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 TTC39CQ8N584 583 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 ZNF606Q8WXB4 792 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 APBB2Q92870 758 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 LPPQ93052 612 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 TRIM43Q96BQ3 446 aaPredicted RBP9.38□□□□□ -0.91
DDB1-213ENST00000539332 TRIM11Q96F44 468 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 HES6Q96HZ4 224 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 ZFP42Q96MM3 310 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 ZSWIM1Q9BR11 485 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 OSGEPQ9NPF4 335 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 PRDM5Q9NQX1 630 aaPredicted RBP9.38□□□□□ -0.91
DDB1-213ENST00000539332 LTBP2Q14767 1821 aa9.38□□□□□ -0.91
DDB1-213ENST00000539332 CARNS1A5YM72 827 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 GOLGA6CA6NDK9 693 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 ARL5CA6NH57 179 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 PDE2AO00408 941 aaPredicted RBP9.37□□□□□ -0.91
DDB1-213ENST00000539332 NCK2O43639 380 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 KIF4AO95239 1232 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 TIMP1P01033 207 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 KRT19P08727 400 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 GOLGA6DP0CG33 693 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 P4HA1P13674 534 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 CYP3A5P20815 502 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 ABCB4P21439 1286 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 MLH1P40692 756 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 GUCY2FP51841 1108 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 NAP1L1P55209 391 aaKnown RBP9.37□□□□□ -0.91
DDB1-213ENST00000539332 FAM189BP81408 668 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 PTP4A2Q12974 167 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 TCTN1Q2MV58 587 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 FOXR1Q6PIV2 292 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 LIMS2Q7Z4I7 341 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 DEFB128Q7Z7B8 93 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 MCOLN2Q8IZK6 566 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 RNF169Q8NCN4 708 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 GSTCDQ8NEC7 633 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 BEST2Q8NFU1 509 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 WHAMMQ8TF30 809 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 VWCEQ96DN2 955 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 HPDLQ96IR7 371 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 GAD1Q99259 594 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 SMYD3Q9H7B4 428 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 RNF19AQ9NV58 838 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 GOLGA6AQ9NYA3 693 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 RNF14Q9UBS8 474 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 UBQLN1Q9UMX0 589 aaKnown RBP9.37□□□□□ -0.91
DDB1-213ENST00000539332 AGAP1Q9UPQ3 857 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 RANBP2P49792 3224 aaKnown RBP9.37□□□□□ -0.91
DDB1-213ENST00000539332 PTPRDP23468 1912 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 GOLGA6BA6NDN3 693 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 PIRO00625 290 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 ENPP3O14638 875 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 PTGESO14684 152 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 CLGNO14967 610 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 XPOTO43592 962 aaKnown RBP9.37□□□□□ -0.91
DDB1-213ENST00000539332 SRGAP2O75044 1071 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 EOMESO95936 686 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 CFHP08603 1231 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 WEE2P0C1S8 567 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 RAG1P15918 1043 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 IBSPP21815 317 aaPredicted RBP9.37□□□□□ -0.91
DDB1-213ENST00000539332 LRPAP1P30533 357 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 RFC2P35250 354 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 RAD23BP54727 409 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 C1QBPQ07021 282 aaKnown RBP9.37□□□□□ -0.91
DDB1-213ENST00000539332 WDR72Q3MJ13 1102 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 SCARA5Q6ZMJ2 495 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 SLC4A11Q8NBS3 891 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 C18orf25Q96B23 403 aaPredicted RBP9.37□□□□□ -0.91
DDB1-213ENST00000539332 ZNF653Q96CK0 615 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 PGBD4Q96DM1 585 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 CYFIP2Q96F07 1278 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 PPP1R10Q96QC0 940 aaKnown RBP9.37□□□□□ -0.91
DDB1-213ENST00000539332 MMS19Q96T76 1030 aa9.37□□□□□ -0.91
DDB1-213ENST00000539332 ZNF518BQ9C0D4 1074 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms