RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 FANCBQ8NB91 859 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 C3orf20Q8ND61 904 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 DENND1AQ8TEH3 1009 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 ZNF48Q96MX3 618 aaPredicted RBP6.7□□□□□ -1.34
CCDC7-209ENST00000539197 MACROD1Q9BQ69 325 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 POLHQ9Y253 713 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 TNKSO95271 1327 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 ZNF521Q96K83 1311 aa6.7□□□□□ -1.34
CCDC7-209ENST00000539197 PPP6CO00743 305 aa6.69□□□□□ -1.34
CCDC7-209ENST00000539197 ARIH2O95376 493 aa6.69□□□□□ -1.34
CCDC7-209ENST00000539197 AHSGP02765 367 aa6.69□□□□□ -1.34
CCDC7-209ENST00000539197 FXR1P51114 621 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC7-209ENST00000539197 TCF15Q12870 199 aa6.69□□□□□ -1.34
CCDC7-209ENST00000539197 PTPN21Q16825 1174 aa6.69□□□□□ -1.34
CCDC7-209ENST00000539197 AARS2Q5JTZ9 985 aaKnown RBP6.69□□□□□ -1.34
CCDC7-209ENST00000539197 PRAMEF17Q5VTA0 474 aa6.69□□□□□ -1.34
CCDC7-209ENST00000539197 TMEM108Q6UXF1 575 aa6.69□□□□□ -1.34
CCDC7-209ENST00000539197 PPP1R3BQ86XI6 285 aa6.69□□□□□ -1.34
CCDC7-209ENST00000539197 NELL2Q99435 816 aa6.69□□□□□ -1.34
CCDC7-209ENST00000539197 ABCF2Q9UG63 623 aa6.69□□□□□ -1.34
CCDC7-209ENST00000539197 TBC1D30Q9Y2I9 924 aa6.69□□□□□ -1.34
CCDC7-209ENST00000539197 QSOX1O00391 747 aa6.68□□□□□ -1.34
CCDC7-209ENST00000539197 MOSPD3O75425 235 aa6.68□□□□□ -1.34
CCDC7-209ENST00000539197 SFPQP23246 707 aaKnown RBP eCLIP6.68□□□□□ -1.34
CCDC7-209ENST00000539197 ADKP55263 362 aaKnown RBP6.68□□□□□ -1.34
CCDC7-209ENST00000539197 SLC18B1Q6NT16 456 aa6.68□□□□□ -1.34
CCDC7-209ENST00000539197 SLC2A7Q6PXP3 512 aa6.68□□□□□ -1.34
CCDC7-209ENST00000539197 SPC25Q9HBM1 224 aa6.68□□□□□ -1.34
CCDC7-209ENST00000539197 DLL3Q9NYJ7 618 aa6.68□□□□□ -1.34
CCDC7-209ENST00000539197 GNAI2P04899 355 aa6.67□□□□□ -1.34
CCDC7-209ENST00000539197 CDK11BP21127 795 aaKnown RBP6.67□□□□□ -1.34
CCDC7-209ENST00000539197 CYP2C18P33260 490 aa6.67□□□□□ -1.34
CCDC7-209ENST00000539197 NOGQ13253 232 aa6.67□□□□□ -1.34
CCDC7-209ENST00000539197 HEATR3Q7Z4Q2 680 aa6.67□□□□□ -1.34
CCDC7-209ENST00000539197 WDR53Q7Z5U6 358 aaPredicted RBP6.67□□□□□ -1.34
CCDC7-209ENST00000539197 DTX2Q86UW9 622 aa6.67□□□□□ -1.34
CCDC7-209ENST00000539197 FAM46DQ8NEK8 389 aa6.67□□□□□ -1.34
CCDC7-209ENST00000539197 DDX17Q92841 729 aaKnown RBP6.67□□□□□ -1.34
CCDC7-209ENST00000539197 CAMKK2Q96RR4 588 aa6.67□□□□□ -1.34
CCDC7-209ENST00000539197 MRPL46Q9H2W6 279 aaKnown RBP6.67□□□□□ -1.34
CCDC7-209ENST00000539197 DCLK1O15075 740 aa6.66□□□□□ -1.34
CCDC7-209ENST00000539197 KCNAB3O43448 404 aa6.66□□□□□ -1.34
CCDC7-209ENST00000539197 TUBB4AP04350 444 aa6.66□□□□□ -1.34
CCDC7-209ENST00000539197 EEFSECP57772 596 aaKnown RBP6.66□□□□□ -1.34
CCDC7-209ENST00000539197 TREML2Q5T2D2 321 aa6.66□□□□□ -1.34
CCDC7-209ENST00000539197 NAPRTQ6XQN6 538 aa6.66□□□□□ -1.34
CCDC7-209ENST00000539197 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
CCDC7-209ENST00000539197 TTYH3Q9C0H2 523 aa6.66□□□□□ -1.34
CCDC7-209ENST00000539197 SPRTNQ9H040 489 aaPredicted RBP6.66□□□□□ -1.34
CCDC7-209ENST00000539197 WDCPQ9H6R7 721 aa6.66□□□□□ -1.34
CCDC7-209ENST00000539197 ZDHHC8Q9ULC8 765 aa6.66□□□□□ -1.34
CCDC7-209ENST00000539197 FNDC1Q4ZHG4 1894 aaPredicted RBP6.65□□□□□ -1.34
CCDC7-209ENST00000539197 PRRT4C9JH25 899 aa6.65□□□□□ -1.34
CCDC7-209ENST00000539197 SLC16A3O15427 465 aaKnown RBP6.65□□□□□ -1.34
CCDC7-209ENST00000539197 TLR5O60602 858 aa6.65□□□□□ -1.34
CCDC7-209ENST00000539197 IL6RP08887 468 aaPredicted RBP6.65□□□□□ -1.34
CCDC7-209ENST00000539197 ENGP17813 658 aa6.65□□□□□ -1.34
CCDC7-209ENST00000539197 CYP4F2P78329 520 aa6.65□□□□□ -1.34
CCDC7-209ENST00000539197 THEMIS2Q5TEJ8 643 aa6.65□□□□□ -1.34
CCDC7-209ENST00000539197 SFRP4Q6FHJ7 346 aaPredicted RBP6.65□□□□□ -1.34
CCDC7-209ENST00000539197 SLC46A1Q96NT5 459 aa6.65□□□□□ -1.34
CCDC7-209ENST00000539197 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.65□□□□□ -1.34
CCDC7-209ENST00000539197 SERTAD3Q9UJW9 196 aa6.65□□□□□ -1.34
CCDC7-209ENST00000539197 SSX2IPQ9Y2D8 614 aa6.65□□□□□ -1.34
CCDC7-209ENST00000539197 PCDHA1Q9Y5I3 950 aa6.65□□□□□ -1.34
CCDC7-209ENST00000539197 MYO1FO00160 1098 aa6.64□□□□□ -1.35
CCDC7-209ENST00000539197 ONECUT2O95948 504 aa6.64□□□□□ -1.35
CCDC7-209ENST00000539197 PDCP20941 246 aa6.64□□□□□ -1.35
CCDC7-209ENST00000539197 HK3P52790 923 aa6.64□□□□□ -1.35
CCDC7-209ENST00000539197 EXOSC9Q06265 439 aaKnown RBP6.64□□□□□ -1.35
CCDC7-209ENST00000539197 PCID2Q5JVF3 399 aa6.64□□□□□ -1.35
CCDC7-209ENST00000539197 FAM160B1Q5W0V3 765 aa6.64□□□□□ -1.35
CCDC7-209ENST00000539197 ICE2Q659A1 982 aa6.64□□□□□ -1.35
CCDC7-209ENST00000539197 PCSK9Q8NBP7 692 aaKnown RBP6.64□□□□□ -1.35
CCDC7-209ENST00000539197 SH2B3Q9UQQ2 575 aa6.64□□□□□ -1.35
CCDC7-209ENST00000539197 SLC16A6O15403 523 aa6.63□□□□□ -1.35
CCDC7-209ENST00000539197 DNAJB5O75953 348 aa6.63□□□□□ -1.35
CCDC7-209ENST00000539197 FTLP02792 175 aaPredicted RBP6.63□□□□□ -1.35
CCDC7-209ENST00000539197 FESP07332 822 aa6.63□□□□□ -1.35
CCDC7-209ENST00000539197 HOXB6P17509 224 aaKnown RBP6.63□□□□□ -1.35
CCDC7-209ENST00000539197 CCT4P50991 539 aaKnown RBP6.63□□□□□ -1.35
CCDC7-209ENST00000539197 MAP2K6P52564 334 aa6.63□□□□□ -1.35
CCDC7-209ENST00000539197 CHSY1Q86X52 802 aa6.63□□□□□ -1.35
CCDC7-209ENST00000539197 MIER2Q8N344 545 aa6.63□□□□□ -1.35
CCDC7-209ENST00000539197 CPA6Q8N4T0 437 aa6.63□□□□□ -1.35
CCDC7-209ENST00000539197 PRPF38AQ8NAV1 312 aaKnown RBP6.63□□□□□ -1.35
CCDC7-209ENST00000539197 RGMAQ96B86 450 aa6.63□□□□□ -1.35
CCDC7-209ENST00000539197 PUS7Q96PZ0 661 aaKnown RBP6.63□□□□□ -1.35
CCDC7-209ENST00000539197 SMAD5Q99717 465 aaKnown RBP6.63□□□□□ -1.35
CCDC7-209ENST00000539197 DUSP22Q9NRW4 184 aa6.63□□□□□ -1.35
CCDC7-209ENST00000539197 FEZ2Q9UHY8 353 aaPredicted RBP6.63□□□□□ -1.35
CCDC7-209ENST00000539197 PPEF2O14830 753 aa6.62□□□□□ -1.35
CCDC7-209ENST00000539197 TOP3BO95985 862 aaKnown RBP6.62□□□□□ -1.35
CCDC7-209ENST00000539197 PIM1P11309 404 aaPredicted RBP6.62□□□□□ -1.35
CCDC7-209ENST00000539197 HDCP19113 662 aa6.62□□□□□ -1.35
CCDC7-209ENST00000539197 MMP13P45452 471 aa6.62□□□□□ -1.35
CCDC7-209ENST00000539197 AMPD3Q01432 767 aa6.62□□□□□ -1.35
CCDC7-209ENST00000539197 CELF5Q8N6W0 485 aaKnown RBP6.62□□□□□ -1.35
CCDC7-209ENST00000539197 ANLNQ9NQW6 1124 aa6.62□□□□□ -1.35
CCDC7-209ENST00000539197 PDGFCQ9NRA1 345 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms