RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 ZNF398Q8TD17 642 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 INPP5DQ92835 1189 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 TMEM143Q96AN5 459 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 STAMBPL1Q96FJ0 436 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 CDHR1Q96JP9 859 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 ARHGEF4Q9NR80 690 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 KCNG1Q9UIX4 513 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 C15orf41Q9Y2V0 281 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 PLXNB2O15031 1838 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 B4GALT4O60513 344 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 TMEM63AO94886 807 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 IQCF3P0C7M6 154 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 KRT5P13647 590 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 IL4RP24394 825 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 RPS12P25398 132 aaKnown RBP7.31□□□□□ -1.24
PROM1-219ENST00000539194 RFC5P40937 340 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 PIK3CAP42336 1068 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 AP3M2P53677 418 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 NCOA4Q13772 614 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 PIGHQ14442 188 aaPredicted RBP7.31□□□□□ -1.24
PROM1-219ENST00000539194 MAPK6Q16659 721 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 FAM133BQ5BKY9 247 aaKnown RBP7.31□□□□□ -1.24
PROM1-219ENST00000539194 TSHZ1Q6ZSZ6 1077 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 PHLDB2Q86SQ0 1253 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 IGDCC3Q8IVU1 814 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 ZNF280CQ8ND82 737 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 MCRS1Q96EZ8 462 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 C11orf84Q9BUA3 381 aaPredicted RBP7.31□□□□□ -1.24
PROM1-219ENST00000539194 TARS2Q9BW92 718 aaKnown RBP7.31□□□□□ -1.24
PROM1-219ENST00000539194 NSRP1Q9H0G5 558 aaKnown RBP7.31□□□□□ -1.24
PROM1-219ENST00000539194 SDCBP2Q9H190 292 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 ACSS3Q9H6R3 686 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 SLCO1B3Q9NPD5 702 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 DNAJC17Q9NVM6 304 aaKnown RBP7.31□□□□□ -1.24
PROM1-219ENST00000539194 KLHL14Q9P2G3 628 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 LRRC42Q9Y546 428 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 TEX264Q9Y6I9 313 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 DNAJC6O75061 913 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 PEX11AO75192 247 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 ELF1P32519 619 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 MSH2P43246 934 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 CDR1P51861 262 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 TAP1Q03518 808 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 STRN3Q13033 797 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 KCNJ11Q14654 390 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 SNRNP48Q6IEG0 339 aaKnown RBP7.31□□□□□ -1.24
PROM1-219ENST00000539194 LBX2Q6XYB7 198 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 XYLT1Q86Y38 959 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 PASD1Q8IV76 773 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.31□□□□□ -1.24
PROM1-219ENST00000539194 MIPEPQ99797 713 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 NFKBIZQ9BYH8 718 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 FZD8Q9H461 694 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 CISHQ9NSE2 258 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 SENP1Q9P0U3 644 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 SEPT9Q9UHD8 586 aaPredicted RBP7.31□□□□□ -1.24
PROM1-219ENST00000539194 GGT7Q9UJ14 662 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 PHTF1Q9UMS5 762 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 SMG5Q9UPR3 1016 aaKnown RBP7.31□□□□□ -1.24
PROM1-219ENST00000539194 SCN1AP35498 2009 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 TANC1Q9C0D5 1861 aa7.31□□□□□ -1.24
PROM1-219ENST00000539194 C2CD2LO14523 706 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 TJP3O95049 919 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 GSRP00390 522 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 VIMP08670 466 aaKnown RBP7.3□□□□□ -1.24
PROM1-219ENST00000539194 UBA1P22314 1058 aaKnown RBP7.3□□□□□ -1.24
PROM1-219ENST00000539194 SLC8A3P57103 927 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 AMHR2Q16671 573 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 OTOAQ7RTW8 1153 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 CCDC25Q86WR0 208 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 SRRM1Q8IYB3 904 aaKnown RBP7.3□□□□□ -1.24
PROM1-219ENST00000539194 USP6NLQ92738 828 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 SKA1Q96BD8 255 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 KLRG1Q96E93 195 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 PEBP4Q96S96 227 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 USP29Q9HBJ7 922 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 DDX56Q9NY93 547 aaKnown RBP7.3□□□□□ -1.24
PROM1-219ENST00000539194 NKX1-2Q9UD57 310 aaPredicted RBP7.3□□□□□ -1.24
PROM1-219ENST00000539194 L3MBTL1Q9Y468 752 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 CD2APQ9Y5K6 639 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 H0YHG0 523 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 CNMDO75829 334 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 CALB1P05937 261 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 PFKMP08237 780 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 CCND1P24385 295 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 RFC1P35251 1148 aaPredicted RBP7.3□□□□□ -1.24
PROM1-219ENST00000539194 MAP2K2P36507 400 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 LIG4P49917 911 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 RAD23BP54727 409 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 EFTUD2Q15029 972 aaKnown RBP eCLIP7.3□□□□□ -1.24
PROM1-219ENST00000539194 PKDCCQ504Y2 493 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 TBC1D1Q86TI0 1168 aaPredicted RBP7.3□□□□□ -1.24
PROM1-219ENST00000539194 CHSY1Q86X52 802 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 JOSD2Q8TAC2 188 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 GDAP1Q8TB36 358 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 PTPRN2Q92932 1015 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 KHSRPQ92945 711 aaKnown RBP eCLIP7.3□□□□□ -1.24
PROM1-219ENST00000539194 CFAP57Q96MR6 1250 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 SCLT1Q96NL6 688 aa7.3□□□□□ -1.24
PROM1-219ENST00000539194 MCEEQ96PE7 176 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms