RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 NIFKQ9BYG3 293 aaKnown RBP15.36■□□□□ 0.05
CDCA3-207ENST00000538862 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.36■□□□□ 0.05
CDCA3-207ENST00000538862 KCNK9Q9NPC2 374 aa15.36■□□□□ 0.05
CDCA3-207ENST00000538862 NAALADL1Q9UQQ1 740 aa15.36■□□□□ 0.05
CDCA3-207ENST00000538862 NUB1Q9Y5A7 615 aa15.36■□□□□ 0.05
CDCA3-207ENST00000538862 CFAP73A6NFT4 308 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 LRRIQ4A6NIV6 560 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 TCP11X1B4DZS4 312 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 STRNO43815 780 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 SUN1O94901 812 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 CREB1P16220 341 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 MMP8P22894 467 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 ZNF132P52740 706 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 MCL1Q07820 350 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 LRRC14Q15048 493 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 DAB2IPQ5VWQ8 1189 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 ARHGEF18Q6ZSZ5 1173 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 ZCCHC9Q8N567 271 aaKnown RBP15.35■□□□□ 0.05
CDCA3-207ENST00000538862 UBR7Q8N806 425 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 GBP7Q8N8V2 638 aaPredicted RBP15.35■□□□□ 0.05
CDCA3-207ENST00000538862 ZNF606Q8WXB4 792 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 TARS2Q9BW92 718 aaKnown RBP15.35■□□□□ 0.05
CDCA3-207ENST00000538862 PAK6Q9NQU5 681 aaPredicted RBP15.35■□□□□ 0.05
CDCA3-207ENST00000538862 EURLQ9NYK6 297 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 TMEM191CA6NGB0 347 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 TJP3O95049 919 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 CALB1P05937 261 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 HOXC6P09630 235 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 TMEM191BP0C7N4 346 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 CCND3P30281 292 aaPredicted RBP15.35■□□□□ 0.05
CDCA3-207ENST00000538862 PTPN7P35236 360 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 RDXP35241 583 aaKnown RBP15.35■□□□□ 0.05
CDCA3-207ENST00000538862 GJA8P48165 433 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 VPS41P49754 854 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 COPS2P61201 443 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 SP2Q02086 613 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 NCOA4Q13772 614 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 GSTA5Q7RTV2 222 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 CCDC91Q7Z6B0 441 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 MGARPQ8TDB4 240 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 SLC7A3Q8WY07 619 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 DNAJC17Q9NVM6 304 aaKnown RBP15.35■□□□□ 0.05
CDCA3-207ENST00000538862 CTNNAL1Q9UBT7 734 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 FBXO40Q9UH90 709 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 DRG1Q9Y295 367 aaKnown RBP15.35■□□□□ 0.05
CDCA3-207ENST00000538862 USTQ9Y2C2 406 aa15.35■□□□□ 0.05
CDCA3-207ENST00000538862 NDC80O14777 642 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 LIASO43766 372 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 LSM8O95777 96 aaKnown RBP15.34■□□□□ 0.05
CDCA3-207ENST00000538862 CD58P19256 250 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 RFC5P40937 340 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 SSR1P43307 286 aaKnown RBP15.34■□□□□ 0.05
CDCA3-207ENST00000538862 MAGEA4P43358 317 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 NR1H3Q13133 447 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 STXBP2Q15833 593 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 P3H1Q32P28 736 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 MAP3K21Q5TCX8 1036 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 NUGGCQ68CJ6 796 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 PPP1R21Q6ZMI0 780 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 ANKRD35Q8N283 1001 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 DNERQ8NFT8 737 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 OR5B17Q8NGF7 314 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 MAGEB18Q96M61 343 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 CFAP57Q96MR6 1250 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 TTC25Q96NG3 672 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 SLITRK1Q96PX8 696 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 RBM15Q96T37 977 aaKnown RBP eCLIP15.34■□□□□ 0.056e-7■■□□□ 12.6
CDCA3-207ENST00000538862 IMPG2Q9BZV3 1241 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 HMX1Q9NP08 348 aaPredicted RBP15.34■□□□□ 0.05
CDCA3-207ENST00000538862 FGFR1OP2Q9NVK5 253 aa15.34■□□□□ 0.05
CDCA3-207ENST00000538862 IGKV6D-21A0A0A0MT36 114 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 DNALI1O14645 258 aaPredicted RBP15.33■□□□□ 0.05
CDCA3-207ENST00000538862 ELF3P78545 371 aaPredicted RBP15.33■□□□□ 0.05
CDCA3-207ENST00000538862 TAP1Q03518 808 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 MPP2Q14168 576 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 KCTD2Q14681 263 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 ZBTB41Q5SVQ8 909 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 ZPBP2Q6X784 338 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 ANKS1BQ7Z6G8 1248 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 CYP4X1Q8N118 509 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 CCDC63Q8NA47 563 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 PWWP2AQ96N64 755 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 ZNF518BQ9C0D4 1074 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 CD248Q9HCU0 757 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 NKIRAS1Q9NYS0 192 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 ANKFY1Q9P2R3 1169 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 TPX2Q9ULW0 747 aaKnown RBP15.33■□□□□ 0.05
CDCA3-207ENST00000538862 ARL2BPQ9Y2Y0 163 aa15.33■□□□□ 0.05
CDCA3-207ENST00000538862 MCM3APO60318 1980 aa15.33■□□□□ 0.04
CDCA3-207ENST00000538862 GSTTP1A0A1W2PQM5 241 aa15.33■□□□□ 0.04
CDCA3-207ENST00000538862 GJB6O95452 261 aa15.33■□□□□ 0.04
CDCA3-207ENST00000538862 ASS1P00966 412 aaKnown RBP15.33■□□□□ 0.04
CDCA3-207ENST00000538862 STX2P32856 288 aa15.33■□□□□ 0.04
CDCA3-207ENST00000538862 GALNTL6Q49A17 601 aa15.33■□□□□ 0.04
CDCA3-207ENST00000538862 TDRPQ86YL5 185 aa15.33■□□□□ 0.04
CDCA3-207ENST00000538862 WDR49Q8IV35 697 aa15.33■□□□□ 0.04
CDCA3-207ENST00000538862 BRSK2Q8IWQ3 736 aa15.33■□□□□ 0.04
CDCA3-207ENST00000538862 ANKRD42Q8N9B4 389 aa15.33■□□□□ 0.04
CDCA3-207ENST00000538862 MAML1Q92585 1016 aa15.33■□□□□ 0.04
CDCA3-207ENST00000538862 GRAMD1AQ96CP6 724 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms