RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ZNF746Q6NUN9 644 aaPredicted RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 RNF135Q8IUD6 432 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 C9orf72Q96LT7 481 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 TMEM79Q9BSE2 394 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 CEP44Q9C0F1 390 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 UBA2Q9UBT2 640 aaPredicted RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 GTF3C4Q9UKN8 822 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 SUGT1Q9Y2Z0 365 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 ALG6Q9Y672 507 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 SFI1A8K8P3 1242 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 H3BQF6 201 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 GUCA1CO95843 209 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 APRTP07741 180 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 MUTP22033 750 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 PAX7P23759 505 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 GTF2H1P32780 548 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 UBXN2AP68543 259 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 CACHD1Q5VU97 1274 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 RSBN1Q5VWQ0 802 aaPredicted RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 ACAD10Q6JQN1 1059 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 KIAA0825Q8IV33 1275 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 C1orf131Q8NDD1 294 aaKnown RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 FEZF2Q8TBJ5 459 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 MDM1Q8TC05 714 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 ZNF398Q8TD17 642 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 DIS3LQ8TF46 1054 aaKnown RBP7.2□□□□□ -1.26
SORT1-209ENST00000538502 GDPD5Q8WTR4 605 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 HES6Q96HZ4 224 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 C9orf16Q9BUW7 83 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 NDFIP2Q9NV92 336 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 COMMD8Q9NX08 183 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 HSPBP1Q9NZL4 362 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 DKK3Q9UBP4 350 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 TRIM10Q9UDY6 481 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 TPRKBQ9Y3C4 175 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 RAD54BQ9Y620 910 aa7.2□□□□□ -1.26
SORT1-209ENST00000538502 CYP2D7A0A087X1C5 515 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 UBA6A0AVT1 1052 aaPredicted RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 SPDYE5A6NIY4 337 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 FOXN1O15353 648 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 RHOBTB1O94844 696 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 ELF3P78545 371 aaPredicted RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 WASHC5Q12768 1159 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 COG2Q14746 738 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 CCDC153Q494R4 210 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 SPDYE7PQ495Y7 208 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 ARHGAP17Q68EM7 881 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 SZRD1Q7Z422 152 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 ARID3BQ8IVW6 561 aaPredicted RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 ZCCHC7Q8N3Z6 543 aaKnown RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 OR6P1Q8NGX9 317 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 QKIQ96PU8 341 aaKnown RBP eCLIP7.19□□□□□ -1.269e-7■■■■■ 27.9
SORT1-209ENST00000538502 POLR3FQ9H1D9 316 aaPredicted RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 GDF3Q9NR23 364 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 TMEM51Q9NW97 253 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 TRIM13O60858 407 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 ALADP13716 330 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 FASP25445 335 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 SCNN1DP51172 638 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 ZNF235Q14590 738 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 Q4G0T1 1027 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 ARMC4Q5T2S8 1044 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 SNX30Q5VWJ9 437 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 RNF219Q5W0B1 726 aaPredicted RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 SEL1L3Q68CR1 1132 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 PDPK2PQ6A1A2 396 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 KCNV1Q6PIU1 500 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 ERO1BQ86YB8 467 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 ZNF507Q8TCN5 953 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 BDH2Q9BUT1 245 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 NMRK1Q9NWW6 199 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.19□□□□□ -1.26
SORT1-209ENST00000538502 UNC13AQ9UPW8 1703 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 PREX2Q70Z35 1606 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 VPS4BO75351 444 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 SULT1E1P49888 294 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 MCL1Q07820 350 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 RNF43Q68DV7 783 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 C11orf63Q6NUN7 778 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 CYP4Z1Q86W10 505 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 SLC22A9Q8IVM8 553 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 UNC45BQ8IWX7 931 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 STKLD1Q8NE28 680 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 SHCBP1Q8NEM2 672 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 AENQ8WTP8 325 aaKnown RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 LXNQ9BS40 222 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 UBE2OQ9C0C9 1292 aaKnown RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 TMEM117Q9H0C3 514 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 ZFYVE16Q7Z3T8 1539 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 HEATR9A2RTY3 570 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 USP17L5A8MUK1 530 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 PHGDHO43175 533 aaKnown RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 RALAP11233 206 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 SERPINH1P50454 418 aaKnown RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 TRIM25Q14258 630 aaKnown RBP7.19□□□□□ -1.26
SORT1-209ENST00000538502 RGS21Q2M5E4 152 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 SUPT20HL1Q3ZLR7 823 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 FAM45BPQ6NSW5 357 aa7.19□□□□□ -1.26
SORT1-209ENST00000538502 CCDC81Q6ZN84 652 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms