RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ANKS4BQ8N8V4 417 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 C1orf127Q8N9H9 656 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 SEC14L1Q92503 715 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 HPDLQ96IR7 371 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 SLITRK1Q96PX8 696 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 CXCL16Q9H2A7 254 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 NAALADL1Q9UQQ1 740 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 TMEM191CA6NGB0 347 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 ACKR2O00590 384 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 ATP2A1O14983 1001 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 ATG7O95352 703 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 HOXC6P09630 235 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 CETPP11597 493 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 AKAP5P24588 427 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 ADORA2AP29274 412 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 ADORA2BP29275 332 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 ICAM3P32942 547 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 CDH6P55285 790 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 ACTN3Q08043 901 aaPredicted RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 TARBP2Q15633 366 aaKnown RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 DARS2Q6PI48 645 aaKnown RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 WDTC1Q8N5D0 677 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 OR6B3Q8NGW1 331 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 STMN4Q9H169 189 aaPredicted RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 CYTH4Q9UIA0 394 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 STK38LQ9Y2H1 464 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 DYNC1LI2O43237 492 aaPredicted RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 AGTP01019 485 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 IL1R2P27930 398 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 SSTR1P30872 391 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 PHKA2P46019 1235 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 C1QBPQ07021 282 aaKnown RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 ZNF252P-AS1Q0IIN9 211 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 KRT81Q14533 505 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 HADHQ16836 314 aaKnown RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 PLEKHA7Q6IQ23 1121 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 TBC1D1Q86TI0 1168 aaPredicted RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 CTAGE3PQ8IX95 158 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 RBM41Q96IZ5 413 aaKnown RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 JPH2Q9BR39 696 aaPredicted RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 SDCBP2Q9H190 292 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 TMEM134Q9H6X4 195 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 CNOT10Q9H9A5 744 aaKnown RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 TMEM51Q9NW97 253 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 ERAP1Q9NZ08 941 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 CPSF3Q9UKF6 684 aaKnown RBP9.17□□□□□ -0.94
UBE3B-208ENST00000538070 NR2E3Q9Y5X4 410 aa9.17□□□□□ -0.94
UBE3B-208ENST00000538070 PMM2O15305 246 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 PSTPIP1O43586 416 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 NPTXRO95502 500 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 LGALS2P05162 132 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 PDGFRAP16234 1089 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 GDF10P55107 478 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 EFTUD2Q15029 972 aaKnown RBP eCLIP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 ZPBP2Q6X784 338 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 CATSPER4Q7RTX7 472 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 SCUBE3Q8IX30 993 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 PALM2Q8IXS6 379 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 RCOR2Q8IZ40 523 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 EXD1Q8NHP7 514 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 PIWIL1Q96J94 861 aaKnown RBP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 FAM129AQ9BZQ8 928 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 EVPLQ92817 2033 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 HBP1O60381 514 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 ERBB2P04626 1255 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 NUDT17P0C025 328 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 TGFB3P10600 412 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 ARF4P18085 180 aaPredicted RBP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 NDST1P52848 882 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 DRG2P55039 364 aaKnown RBP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 YWHAGP61981 247 aaKnown RBP eCLIP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 TMEM132DQ14C87 1099 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 E2F5Q15329 346 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 CCNG2Q16589 344 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 PHF13Q86YI8 300 aaPredicted RBP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 KIF2BQ8N4N8 673 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 EIF1ADQ8N9N8 165 aaKnown RBP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 SPOCK2Q92563 424 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 TLCD1Q96CP7 247 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 TXLNGYQ9BZA5 131 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 C2orf40Q9H1Z8 148 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 PIH1D1Q9NWS0 290 aaKnown RBP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 SNTG2Q9NY99 539 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 WHRNQ9P202 907 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 PPEF2O14830 753 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 LIASO43766 372 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 MICAL2O94851 1124 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 DRD4P21917 467 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 CA4P22748 312 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 GBP1P32455 592 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 ASPAP45381 313 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 RABGGTBP53611 331 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 PTPN11Q06124 597 aaPredicted RBP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 PTK6Q13882 451 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 ERMARDQ5T6L9 678 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 TRMT10CQ7L0Y3 403 aaKnown RBP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 PYROXD1Q8WU10 500 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 TBC1D31Q96DN5 1066 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 TGS1Q96RS0 853 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms