RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 DHX37Q8IY37 1157 aaKnown RBP12.78□□□□□ -0.36
CPSF7-218ENST00000537641 MZB1Q8WU39 189 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 ZNF516Q92618 1163 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 PTCD3Q96EY7 689 aaKnown RBP12.78□□□□□ -0.36
CPSF7-218ENST00000537641 BTBD10Q9BSF8 475 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 KIFC3Q9BVG8 833 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 TRIM55Q9BYV6 548 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 YIPF3Q9GZM5 350 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 VCXQ9H320 206 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 NPHS2Q9NP85 383 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 RABGEF1Q9UJ41 708 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 LRCH1Q9Y2L9 728 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 MTO1Q9Y2Z2 717 aaKnown RBP12.78□□□□□ -0.36
CPSF7-218ENST00000537641 CTDP1Q9Y5B0 961 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-218ENST00000537641 PCDHB4Q9Y5E5 795 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 KIAA1217Q5T5P2 1943 aa12.78□□□□□ -0.36
CPSF7-218ENST00000537641 CLUHO75153 1309 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 TMEM150BA6NC51 233 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 NFKBIEO00221 500 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 HNRNPDLO14979 420 aaKnown RBP12.77□□□□□ -0.36
CPSF7-218ENST00000537641 EGFRP00533 1210 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 ZSCAN5DPP0CG00 497 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 ATF7P17544 494 aaPredicted RBP12.77□□□□□ -0.36
CPSF7-218ENST00000537641 PEX19P40855 299 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 GPX6P59796 221 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 OCRLQ01968 901 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 PGM5Q15124 567 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 CCDC6Q16204 474 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 HIF1AQ16665 826 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 TBC1D10BQ4KMP7 808 aaPredicted RBP12.77□□□□□ -0.36
CPSF7-218ENST00000537641 KAZNQ674X7 775 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 PPIL6Q8IXY8 311 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 BSNDQ8WZ55 320 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 KCNN1Q92952 543 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 NSL1Q96IY1 281 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 FNBP1Q96RU3 617 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 MIPEPQ99797 713 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 FAM213AQ9BRX8 229 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 CADM1Q9BY67 442 aaKnown RBP12.77□□□□□ -0.36
CPSF7-218ENST00000537641 ACSS3Q9H6R3 686 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 HOMER2Q9NSB8 354 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 KANSL3Q9P2N6 904 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 KCNG1Q9UIX4 513 aa12.77□□□□□ -0.36
CPSF7-218ENST00000537641 SCAF8Q9UPN6 1271 aaKnown RBP12.77□□□□□ -0.36
CPSF7-218ENST00000537641 DPPA5A6NC42 116 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 TMEM191CA6NGB0 347 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 E7ESA3 106 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 PI4K2BG5E9Z4 385 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
CPSF7-218ENST00000537641 TMEM191BP0C7N4 346 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 FGFR1P11362 822 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 SKIP12755 728 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 KRT10P13645 584 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 KRT4P19013 534 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 GLRA2P23416 452 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 ARFIP2P53365 341 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 RPS6P62753 249 aaKnown RBP12.76□□□□□ -0.37
CPSF7-218ENST00000537641 MXRA7P84157 204 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 CDK16Q00536 496 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 MTMR2Q13614 643 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 C2CD6Q53TS8 623 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 XRRA1Q6P2D8 792 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 MTDHQ86UE4 582 aaKnown RBP12.76□□□□□ -0.37
CPSF7-218ENST00000537641 PASD1Q8IV76 773 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 ARHGAP24Q8N264 748 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 ZNF276Q8N554 614 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 BANPQ8N9N5 519 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 SLC35B2Q8TB61 432 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 SKA1Q96BD8 255 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 FAM136AQ96C01 138 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 BICD1Q96G01 975 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 TAAR1Q96RJ0 339 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 PAFAH2Q99487 392 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 SH2D3AQ9BRG2 576 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 RPAP3Q9H6T3 665 aaPredicted RBP12.76□□□□□ -0.37
CPSF7-218ENST00000537641 PXMP2Q9NR77 195 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 NMRK1Q9NWW6 199 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 EFR3BQ9Y2G0 817 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 SIGLEC16A6NMB1 481 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 H0Y3Z8 333 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 GSC2O15499 205 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 ENTPD5O75356 428 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 LSM8O95777 96 aaKnown RBP12.76□□□□□ -0.37
CPSF7-218ENST00000537641 ETS1P14921 441 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 EIF2AK2P19525 551 aaKnown RBP12.76□□□□□ -0.37
CPSF7-218ENST00000537641 MMP8P22894 467 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 ADRA1DP25100 572 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 GMPSP49915 693 aaPredicted RBP12.76□□□□□ -0.37
CPSF7-218ENST00000537641 TFDP3Q5H9I0 405 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 TDRD10Q5VZ19 366 aaKnown RBP12.76□□□□□ -0.37
CPSF7-218ENST00000537641 DCAF15Q66K64 600 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 MFN1Q8IWA4 741 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 MICALL2Q8IY33 904 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.76□□□□□ -0.374e-6■■■■■ 36.6
CPSF7-218ENST00000537641 NIPA2Q8N8Q9 360 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 TTC13Q8NBP0 860 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 PYROXD1Q8WU10 500 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 ELMO3Q96BJ8 720 aa12.76□□□□□ -0.37
CPSF7-218ENST00000537641 RMDN3Q96TC7 470 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms