RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 PRPF40AO75400 957 aaKnown RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 PRPF6O94906 941 aaKnown RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 CSH1P0DML2 217 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 CSH2P0DML3 217 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 TDGF1P13385 188 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 ACAT1P24752 427 aaKnown RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 DDX6P26196 483 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHD4-207ENST00000537634 NASPP49321 788 aaPredicted RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 NLRP12P59046 1061 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 RPL10AP62906 217 aaKnown RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 RBP5P82980 135 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 SATB1Q01826 763 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 ITPRIPL2Q3MIP1 535 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 TXNDC11Q6PKC3 985 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 ADGRF2Q8IZF7 708 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 CMTM8Q8IZV2 173 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 GPD1LQ8N335 351 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 CSGALNACT2Q8N6G5 542 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 MAB21L3Q8N8X9 362 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 LEO1Q8WVC0 666 aaPredicted RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 MRPS31Q92665 395 aaKnown RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 ANKRD36BP1Q96IX9 119 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 ACBD6Q9BR61 282 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 SLC46A2Q9BY10 475 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 MTMR12Q9C0I1 747 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 LRRC27Q9C0I9 530 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 SMG9Q9H0W8 520 aaKnown RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 TNMDQ9H2S6 317 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 PDE11AQ9HCR9 933 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 ABCB6Q9NP58 842 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 RBM12Q9NTZ6 932 aaKnown RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 TMLHEQ9NVH6 421 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 DDX43Q9NXZ2 648 aaKnown RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 UXTQ9UBK9 157 aaPredicted RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 MAGED2Q9UNF1 606 aaPredicted RBP10.41□□□□□ -0.74
CHD4-207ENST00000537634 SNX9Q9Y5X1 595 aa10.41□□□□□ -0.74
CHD4-207ENST00000537634 SPTLC2O15270 562 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 TNNC2P02585 160 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 F11P03951 625 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 HMGA1P17096 107 aaKnown RBP10.4□□□□□ -0.74
CHD4-207ENST00000537634 PCSK1P29120 753 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 GPR15P49685 360 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 TNK2Q07912 1038 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 MYO1EQ12965 1108 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 GAS6Q14393 721 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 PON2Q15165 354 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 LPAL2Q16609 132 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 INTS6LQ5JSJ4 861 aaKnown RBP10.4□□□□□ -0.74
CHD4-207ENST00000537634 PRR23BQ6ZRT6 265 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 Q6ZS52 159 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 TMEM150AQ86TG1 271 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 TOP6BLQ8N6T0 577 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 STKLD1Q8NE28 680 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 SPATA18Q8TC71 538 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 FAM84AQ96KN4 292 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 ZNF396Q96N95 335 aaPredicted RBP10.4□□□□□ -0.74
CHD4-207ENST00000537634 CUEDC2Q9H467 287 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 KIF9Q9HAQ2 790 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 GKN1Q9NS71 199 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 GDAP2Q9NXN4 497 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 USP18Q9UMW8 372 aa10.4□□□□□ -0.74
CHD4-207ENST00000537634 ZNF233A6NK53 670 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 SOBPA7XYQ1 873 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 CHURC1-FNTBB4DL54 471 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 PAPSS2O95340 614 aaPredicted RBP10.39□□□□□ -0.75
CHD4-207ENST00000537634 SDHBP21912 280 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 CYP2F1P24903 491 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 LHX1P48742 406 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 FNTBP49356 437 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 ASIC1P78348 528 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 AMPD3Q01432 767 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 LMNB2Q03252 620 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 CCINQ13939 588 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 SURF1Q15526 300 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 DDR2Q16832 855 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 RSPO4Q2I0M5 234 aaPredicted RBP10.39□□□□□ -0.75
CHD4-207ENST00000537634 WDR44Q5JSH3 913 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 SDHAF4Q5VUM1 108 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 LMBRD2Q68DH5 695 aaPredicted RBP10.39□□□□□ -0.75
CHD4-207ENST00000537634 TXNDC8Q6A555 127 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 LAIR1Q6GTX8 287 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 CC2D1AQ6P1N0 951 aaPredicted RBP10.39□□□□□ -0.75
CHD4-207ENST00000537634 MON1AQ86VX9 555 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 SPATA2LQ8IUW3 424 aaPredicted RBP10.39□□□□□ -0.75
CHD4-207ENST00000537634 SYNPOQ8N3V7 929 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 LINC00301Q8NCQ3 95 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 CXorf38Q8TB03 319 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 USP13Q92995 863 aaPredicted RBP10.39□□□□□ -0.75
CHD4-207ENST00000537634 DHX58Q96C10 678 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 HPDLQ96IR7 371 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 TRPC7Q9HCX4 862 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 TDP1Q9NUW8 608 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 INTS13Q9NVM9 706 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 DLL3Q9NYJ7 618 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 SIX4Q9UIU6 781 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 GTF3C4Q9UKN8 822 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 CCL26Q9Y258 94 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 CEP250Q9BV73 2442 aa10.39□□□□□ -0.75
CHD4-207ENST00000537634 DMDP11532 3685 aa10.38□□□□□ -0.75
CHD4-207ENST00000537634 PTPRJQ12913 1337 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms