RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 PACSIN1Q9BY11 444 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 FAM124BQ9H5Z6 455 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 GTF3C4Q9UKN8 822 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 MTUS1Q9ULD2 1270 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 ADGRG1Q9Y653 693 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 CHD9Q3L8U1 2897 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 RCCD1A6NED2 376 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 USP27XA6NNY8 438 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 C2CD2LO14523 706 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 SYN3O14994 580 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 FGF18O76093 207 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 OAZ2O95190 189 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 CSPG5O95196 566 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 FAM163BP0C2L3 166 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 VDRP11473 427 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 ADORA2BP29275 332 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 CYLC1P35663 651 aaPredicted RBP16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 MRPL58Q14197 206 aaKnown RBP16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 BMS1Q14692 1282 aaKnown RBP16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 SGO2Q562F6 1265 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 KLHL23Q8NBE8 558 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 UBA3Q8TBC4 463 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 SLC2A14Q8TDB8 520 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 AUTS2Q8WXX7 1259 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 PKMYT1Q99640 499 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 TTPALQ9BTX7 342 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 RHOBTB2Q9BYZ6 727 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 NAGPAQ9UK23 515 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 TSPAN16Q9UKR8 245 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 ZKSCAN5Q9Y2L8 839 aa16.63■□□□□ 0.25
SFSWAP-206ENST00000537582 EIF3CLB5ME19 914 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 ADAM12O43184 909 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 NRDCO43847 1150 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 LCA5LO95447 670 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 RPL17P18621 184 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 CTNNB1P35222 781 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 CLEC16AQ2KHT3 1053 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 CTXN3Q4LDR2 81 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 C2CD6Q53TS8 623 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 INTS6LQ5JSJ4 861 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 NAA35Q5VZE5 725 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 PAQR9Q6ZVX9 377 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 TTC30AQ86WT1 665 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 WDTC1Q8N5D0 677 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 CPA5Q8WXQ8 436 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 RIN2Q8WYP3 895 aaPredicted RBP16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 TNIP3Q96KP6 325 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 EIF3CQ99613 913 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 B3GNT5Q9BYG0 378 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 PDCL3Q9H2J4 239 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 CYTH4Q9UIA0 394 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 CDH9Q9ULB4 789 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 PCDHB12Q9Y5F1 795 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 GBF1Q92538 1859 aa16.62■□□□□ 0.25
SFSWAP-206ENST00000537582 M0QYV0 167 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 TULP2O00295 520 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 ABL1P00519 1130 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 CYP1A1P04798 512 aaPredicted RBP16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 DNAJB2P25686 324 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 RGS19P49795 217 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 NOMO3P69849 1222 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 ELAVL2Q12926 359 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 CNGA2Q16280 664 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 CCDC122Q5T0U0 273 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 ALKBH5Q6P6C2 394 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 ZNF677Q86XU0 584 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 FUKQ8N0W3 1084 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 THEM5Q8N1Q8 247 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 C1orf131Q8NDD1 294 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 MYLPFQ96A32 169 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 PCED1BQ96HM7 432 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 ACBD6Q9BR61 282 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 AAASQ9NRG9 546 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 CHST7Q9NS84 486 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 TMEM30AQ9NV96 361 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 TRMT1Q9NXH9 659 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 CHD7Q9P2D1 2997 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 TRIM10Q9UDY6 481 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 PCDHGC3Q9UN70 934 aa16.61■□□□□ 0.25
SFSWAP-206ENST00000537582 ARHGEF37A1IGU5 675 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 SOD2P04179 222 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 UNGP13051 313 aaPredicted RBP16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 PCSK1P29120 753 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 BMPR1AP36894 532 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 CACNA2D1P54289 1103 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 ARPP19P56211 112 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 USP41Q3LFD5 358 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 ARHGAP17Q68EM7 881 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 LCLAT1Q6UWP7 414 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 DDX53Q86TM3 631 aaKnown RBP16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 VPS36Q86VN1 386 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 VPS52Q8N1B4 723 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 SPATA18Q8TC71 538 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 KIAA1524Q8TCG1 905 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 HERC2P3Q9BVR0 1158 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 PBX4Q9BYU1 374 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 ZNF518BQ9C0D4 1074 aa16.6■□□□□ 0.25
SFSWAP-206ENST00000537582 ALG13Q9NP73 1137 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms