RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 C6orf118Q5T5N4 469 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 MFSD7Q6UXD7 560 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 ANKS1BQ7Z6G8 1248 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 CCHCR1Q8TD31 782 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 FNIP1Q8TF40 1166 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 TWNKQ96RR1 684 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 EPN3Q9H201 632 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 CNOT10Q9H9A5 744 aaKnown RBP16.54■□□□□ 0.24
MKS1-204ENST00000537529 HMGXB4Q9UGU5 601 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 SLC12A6Q9UHW9 1150 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 CYTH4Q9UIA0 394 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.54■□□□□ 0.24
MKS1-204ENST00000537529 LIASO43766 372 aa16.53■□□□□ 0.24
MKS1-204ENST00000537529 CAND2O75155 1236 aa16.53■□□□□ 0.24
MKS1-204ENST00000537529 CDC42EP1Q00587 391 aa16.53■□□□□ 0.24
MKS1-204ENST00000537529 ORC1Q13415 861 aa16.53■□□□□ 0.24
MKS1-204ENST00000537529 ZNF268Q14587 947 aaPredicted RBP16.53■□□□□ 0.24
MKS1-204ENST00000537529 KAZNQ674X7 775 aa16.53■□□□□ 0.24
MKS1-204ENST00000537529 DRICH1Q6PGQ1 229 aaPredicted RBP16.53■□□□□ 0.24
MKS1-204ENST00000537529 GSTA5Q7RTV2 222 aa16.53■□□□□ 0.24
MKS1-204ENST00000537529 KIF12Q96FN5 646 aa16.53■□□□□ 0.24
MKS1-204ENST00000537529 STMN4Q9H169 189 aaPredicted RBP16.53■□□□□ 0.24
MKS1-204ENST00000537529 BARX2Q9UMQ3 279 aaPredicted RBP16.53■□□□□ 0.24
MKS1-204ENST00000537529 ZNF236Q9UL36 1845 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 LRRD1A4D1F6 860 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 M0QYV0 167 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 TP73O15350 636 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 RGS16O15492 202 aaPredicted RBP16.52■□□□□ 0.24
MKS1-204ENST00000537529 HMGCRP04035 888 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 KRT10P13645 584 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 RFC1P35251 1148 aaPredicted RBP16.52■□□□□ 0.24
MKS1-204ENST00000537529 CCT5P48643 541 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 INCA1Q0VD86 236 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 HADHQ16836 314 aaKnown RBP16.52■□□□□ 0.24
MKS1-204ENST00000537529 TFDP3Q5H9I0 405 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 XYLT1Q86Y38 959 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 TMEM130Q8N3G9 435 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 NPLOC4Q8TAT6 608 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 CPXM1Q96SM3 734 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 FAM118BQ9BPY3 351 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 GCOM2Q9BZD3 368 aaPredicted RBP16.52■□□□□ 0.24
MKS1-204ENST00000537529 LRRC4CQ9HCJ2 640 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 DERAQ9Y315 318 aa16.52■□□□□ 0.24
MKS1-204ENST00000537529 hCG_1818297A0A087WSY0 165 aa16.52■□□□□ 0.23
MKS1-204ENST00000537529 NDUFAB1O14561 156 aa16.52■□□□□ 0.23
MKS1-204ENST00000537529 ERBB2P04626 1255 aa16.52■□□□□ 0.23
MKS1-204ENST00000537529 KRT7P08729 469 aa16.52■□□□□ 0.23
MKS1-204ENST00000537529 CNGA2Q16280 664 aa16.52■□□□□ 0.23
MKS1-204ENST00000537529 CEP128Q6ZU80 1094 aa16.52■□□□□ 0.23
MKS1-204ENST00000537529 HEXIM2Q96MH2 286 aaKnown RBP16.52■□□□□ 0.23
MKS1-204ENST00000537529 CDC42EP4Q9H3Q1 356 aaKnown RBP16.52■□□□□ 0.23
MKS1-204ENST00000537529 PLEKHA5Q9HAU0 1116 aa16.52■□□□□ 0.23
MKS1-204ENST00000537529 AAASQ9NRG9 546 aa16.52■□□□□ 0.23
MKS1-204ENST00000537529 SETD4Q9NVD3 440 aa16.52■□□□□ 0.23
MKS1-204ENST00000537529 KIAA1257Q9ULG3 409 aa16.52■□□□□ 0.23
MKS1-204ENST00000537529 TLDC2A0PJX2 215 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 NPTXRO95502 500 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 AGTP01019 485 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 CDKN2BP42772 138 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 GABRB2P47870 512 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 VPS41P49754 854 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 MYO1EQ12965 1108 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 KIZQ2M2Z5 673 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 IZUMO3Q5VZ72 239 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 JOSD2Q8TAC2 188 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 IPO4Q8TEX9 1081 aaKnown RBP16.51■□□□□ 0.23
MKS1-204ENST00000537529 RAPGEF5Q92565 580 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 ROPN1BQ9BZX4 212 aaPredicted RBP16.51■□□□□ 0.23
MKS1-204ENST00000537529 ADAMTS10Q9H324 1103 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 RABEP2Q9H5N1 569 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 ROPN1Q9HAT0 212 aaPredicted RBP16.51■□□□□ 0.23
MKS1-204ENST00000537529 METTL5Q9NRN9 209 aaKnown RBP16.51■□□□□ 0.23
MKS1-204ENST00000537529 TJP2Q9UDY2 1190 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 MGAMO43451 1857 aa16.51■□□□□ 0.23
MKS1-204ENST00000537529 DCDC2CA8MYV0 355 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 EBAG9O00559 213 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 RASGRF2O14827 1237 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 CELF2O95319 508 aaKnown RBP16.5■□□□□ 0.23
MKS1-204ENST00000537529 KLRC2P26717 231 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 CHKAP35790 457 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 IRF5Q13568 498 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 TXNRD3NBQ6F5E7 133 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 CATSPER4Q7RTX7 472 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 PTPN18Q99952 460 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 FOXP3Q9BZS1 431 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 MIS12Q9H081 205 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 FAM49AQ9H0Q0 323 aaPredicted RBP16.5■□□□□ 0.23
MKS1-204ENST00000537529 RRP15Q9Y3B9 282 aaKnown RBP16.5■□□□□ 0.23
MKS1-204ENST00000537529 SMIM23A6NLE4 172 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 NDST1P52848 882 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 SLC25A11Q02978 314 aaKnown RBP16.5■□□□□ 0.23
MKS1-204ENST00000537529 PCBP1Q15365 356 aaKnown RBP eCLIP16.5■□□□□ 0.23
MKS1-204ENST00000537529 STILQ15468 1287 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 UBAP2Q5T6F2 1119 aaKnown RBP16.5■□□□□ 0.23
MKS1-204ENST00000537529 SLC27A1Q6PCB7 646 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 SRLQ86TD4 932 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 UHMK1Q8TAS1 419 aaKnown RBP16.5■□□□□ 0.23
MKS1-204ENST00000537529 MCRS1Q96EZ8 462 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 NT5C1AQ9BXI3 368 aa16.5■□□□□ 0.23
MKS1-204ENST00000537529 DNPEPQ9ULA0 475 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms