RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 DNAJC25Q9H1X3 360 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 C17orf75Q9HAS0 396 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 POLD4Q9HCU8 107 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 MARCH5Q9NX47 278 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 MIOSQ9NXC5 875 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 PARP2Q9UGN5 583 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 FAN1Q9Y2M0 1017 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 USP15Q9Y4E8 981 aaPredicted RBP7.72□□□□□ -1.17
YBX3-206ENST00000536823 HCFC2Q9Y5Z7 792 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 IRAK3Q9Y616 596 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 TRIP11Q15643 1979 aa7.71□□□□□ -1.17
YBX3-206ENST00000536823 TECTAO75443 2155 aa7.71□□□□□ -1.17
YBX3-206ENST00000536823 CITO14578 2027 aa7.71□□□□□ -1.17
YBX3-206ENST00000536823 CCDC169A6NNP5 214 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 K7ERI5 159 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 PTGESO14684 152 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 CLASP2O75122 1294 aaKnown RBP7.71□□□□□ -1.18
YBX3-206ENST00000536823 CXCL14O95715 111 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 EFEMP2O95967 443 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 SOD2P04179 222 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 ALDH2P05091 517 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 PLA2G4BP0C869 781 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 HOXB8P17481 243 aaPredicted RBP7.71□□□□□ -1.18
YBX3-206ENST00000536823 CA8P35219 290 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 LONP1P36776 959 aaKnown RBP7.71□□□□□ -1.18
YBX3-206ENST00000536823 UBA7P41226 1012 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 OR1G1P47890 313 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 GRIN1Q05586 938 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 GIT2Q14161 759 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 PTPAQ15257 358 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 ENOX2Q16206 610 aaKnown RBP7.71□□□□□ -1.18
YBX3-206ENST00000536823 ATF7IP2Q5U623 682 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 ANKRD54Q6NXT1 300 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 LLGL2Q6P1M3 1020 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 SYCE2Q6PIF2 218 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 APBB1IPQ7Z5R6 666 aaPredicted RBP7.71□□□□□ -1.18
YBX3-206ENST00000536823 RNF168Q8IYW5 571 aaPredicted RBP7.71□□□□□ -1.18
YBX3-206ENST00000536823 SYT2Q8N9I0 419 aaPredicted RBP7.71□□□□□ -1.18
YBX3-206ENST00000536823 GSTCDQ8NEC7 633 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 GIPC2Q8TF65 315 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 LRRC15Q8TF66 581 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 SUSD6Q92537 303 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 CASP10Q92851 521 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 GATA6Q92908 595 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 SNX21Q969T3 373 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 PLIN2Q99541 437 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 KMT5AQ9NQR1 393 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 DZANK1Q9NVP4 752 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 KCND2Q9NZV8 630 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 MTMR6Q9Y217 621 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 TNFSF13BQ9Y275 285 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 ZNF318Q5VUA4 2279 aa7.71□□□□□ -1.18
YBX3-206ENST00000536823 A6NHS1 94 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 F8W810 466 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 SLC16A4O15374 487 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 TNFRSF21O75509 655 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 URODP06132 367 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 PLS3P13797 630 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 DRD2P14416 443 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 PLCG1P19174 1290 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 CYP27A1Q02318 531 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 RAD51AP2Q09MP3 1159 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 TUSC3Q13454 348 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 KARSQ15046 597 aaKnown RBP7.7□□□□□ -1.18
YBX3-206ENST00000536823 ZNF568Q3ZCX4 644 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 HGSNATQ68CP4 663 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 GPBP1Q86WP2 473 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 WFDC3Q8IUB2 231 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 TMEM87AQ8NBN3 555 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 TMEM161BQ8NDZ6 487 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 GLIS3Q8NEA6 775 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 SLC22A17Q8WUG5 538 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 EZH1Q92800 747 aaPredicted RBP7.7□□□□□ -1.18
YBX3-206ENST00000536823 CALML4Q96GE6 196 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 ACO2Q99798 780 aaKnown RBP7.7□□□□□ -1.18
YBX3-206ENST00000536823 PHF7Q9BWX1 381 aaPredicted RBP7.7□□□□□ -1.18
YBX3-206ENST00000536823 C1QTNF1Q9BXJ1 281 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 MRPL4Q9BYD3 311 aaKnown RBP7.7□□□□□ -1.18
YBX3-206ENST00000536823 CCSER1Q9C0I3 900 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 CDT1Q9H211 546 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 S1PR5Q9H228 398 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 BLOC1S4Q9NUP1 217 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 SNTG2Q9NY99 539 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 ABI2Q9NYB9 513 aaPredicted RBP7.7□□□□□ -1.18
YBX3-206ENST00000536823 ODF2LQ9ULJ1 636 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 CLIC4Q9Y696 253 aa7.7□□□□□ -1.18
YBX3-206ENST00000536823 MORC2Q9Y6X9 1032 aaPredicted RBP7.7□□□□□ -1.18
YBX3-206ENST00000536823 NPHP3-ACAD11A0A0J9YXS1 232 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 CASTOR2A6NHX0 329 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 LOC730098B7Z3J9 87 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 PI4K2BG5E9Z4 385 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 ABLIM1O14639 778 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 DCXO43602 365 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 STX6O43752 255 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 THP07101 528 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 CNPP09543 421 aaKnown RBP7.69□□□□□ -1.18
YBX3-206ENST00000536823 MCF2P10911 925 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 EPCAMP16422 314 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 PROZP22891 400 aa7.69□□□□□ -1.18
YBX3-206ENST00000536823 MARCKSP29966 332 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms