RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SMIM28A0A1B0GU29 152 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SRRM3A6NNA2 597 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 GNGT1P63211 74 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ZNF699Q32M78 642 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SPDYCQ5MJ68 293 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 GSTCDQ8NEC7 633 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ARHGEF26Q96DR7 871 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ATP6V1G3Q96LB4 118 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DDX47Q9H0S4 455 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 YY1AP1Q9H869 796 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TMBIM4Q9HC24 238 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 PRDM5Q9NQX1 630 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 FAM114A2Q9NRY5 505 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DPP3Q9NY33 737 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 POLIQ9UNA4 740 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SQORQ9Y6N5 450 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 MTA2O94776 668 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CLTBP09497 229 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ITGA4P13612 1032 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 RAP1GAPP47736 663 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SCNN1GP51170 649 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 AP3M2P53677 418 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TRPC3Q13507 836 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 MTMR3Q13615 1198 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 C11orf63Q6NUN7 778 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TOX2Q96NM4 488 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 THAP2Q9H0W7 228 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 PLEKHA5Q9HAU0 1116 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TAS2R14Q9NYV8 317 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 PLAAQ9Y263 795 aa13.74□□□□□ -0.21
CDK5RAP3-202ENST00000536708 A0A0U1RQF3 1178 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ARL5CA6NH57 179 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 MIF4GDA9UHW6 222 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 GZMAP12544 262 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 IGFBP6P24592 240 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 HSD17B3P37058 310 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 USP8P40818 1118 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 HLTFQ14527 1009 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ZBTB6Q15916 424 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 UAP1Q16222 522 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 PLEKHG4Q58EX7 1191 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 WDR44Q5JSH3 913 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DCAF12L1Q5VU92 463 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 NECAB2Q7Z6G3 386 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 VWCEQ96DN2 955 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 IMPG2Q9BZV3 1241 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 MIOSQ9NXC5 875 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 NXF1Q9UBU9 619 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 AMACRQ9UHK6 382 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 AGAP1Q9UPQ3 857 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 INPP5FQ9Y2H2 1132 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CEP290O15078 2479 aa13.73□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 FAM187AA6NFU0 413 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 C9IYK1 514 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 RTN2O75298 545 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 FGGP02679 453 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ABCB4P21439 1286 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ASPAP45381 313 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DRG2P55039 364 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CUL2Q13617 745 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 XKR4Q5GH76 650 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ZNF598Q86UK7 904 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ECHDC2Q86YB7 292 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 PALB2Q86YC2 1186 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SUGP1Q8IWZ8 645 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 FAM71AQ8IYT1 594 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SHC3Q92529 594 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TRIM43Q96BQ3 446 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 PPP1R10Q96QC0 940 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 RPS6KC1Q96S38 1066 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TRAIPQ9BWF2 469 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 NEUROG2Q9H2A3 272 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 COG5Q9UP83 839 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 RANBP2P49792 3224 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.216e-7■■■□□ 17.4
CDK5RAP3-202ENST00000536708 POMCP01189 267 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 FGFR1P11362 822 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 KCNE1P15382 129 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CD58P19256 250 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CCT5P48643 541 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 RAB27AP51159 221 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 GPC5P78333 572 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 GCNT1Q02742 428 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 WDR72Q3MJ13 1102 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 UBE2Q1Q7Z7E8 422 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 MRPL10Q7Z7H8 261 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 BCAS4Q8TDM0 211 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SLC20A1Q8WUM9 679 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 RNPC3Q96LT9 517 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 NIF3L1Q9GZT8 377 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 RAB17Q9H0T7 212 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SMYD3Q9H7B4 428 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 RSAD1Q9HA92 442 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 RGS18Q9NS28 235 aa13.72□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ITGA11Q9UKX5 1188 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms