RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PTGS2P35354 604 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 CTCFP49711 727 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-207ENST00000536634 ADKP55263 362 aaKnown RBP6.9□□□□□ -1.3
CLIP1-207ENST00000536634 ANAPC15P60006 121 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 CDC42EP1Q00587 391 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 EXOSC10Q01780 885 aaKnown RBP6.9□□□□□ -1.3
CLIP1-207ENST00000536634 FHL2Q14192 279 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 Q6ZPA2 131 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 LRRC55Q6ZSA7 311 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 PLXDC1Q8IUK5 500 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 IFI44Q8TCB0 444 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 SORCS2Q96PQ0 1159 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 PCDHB1Q9Y5F3 818 aa6.9□□□□□ -1.3
CLIP1-207ENST00000536634 KIF24Q5T7B8 1368 aa6.9□□□□□ -1.31
CLIP1-207ENST00000536634 CARMIL3Q8ND23 1372 aa6.9□□□□□ -1.31
CLIP1-207ENST00000536634 FER1L6Q2WGJ9 1857 aa6.9□□□□□ -1.31
CLIP1-207ENST00000536634 SZT2Q5T011 3432 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 CCDC78A2IDD5 438 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 RNASET2O00584 256 aaKnown RBP6.89□□□□□ -1.31
CLIP1-207ENST00000536634 HSPA8P11142 646 aaKnown RBP6.89□□□□□ -1.31
CLIP1-207ENST00000536634 LAG3P18627 525 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 TM4SF1P30408 202 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 CRKLP46109 303 aaKnown RBP6.89□□□□□ -1.31
CLIP1-207ENST00000536634 CTXN1P60606 82 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 BEAN1Q3B7T3 259 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 RSPH3Q86UC2 560 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 RHOT2Q8IXI1 618 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 CMTR2Q8IYT2 770 aaKnown RBP6.89□□□□□ -1.31
CLIP1-207ENST00000536634 SYNE4Q8N205 404 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 OR56A1Q8NGH5 318 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 KLHL11Q9NVR0 708 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 FAM30AQ9NZY2 134 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 MAP3K2Q9Y2U5 619 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 HS3ST4Q9Y661 456 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 PASKQ96RG2 1323 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 COL11A2P13942 1736 aaPredicted RBP6.89□□□□□ -1.31
CLIP1-207ENST00000536634 ANKRD31Q8N7Z5 1873 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 CENPFP49454 3210 aa6.89□□□□□ -1.31
CLIP1-207ENST00000536634 CENPVL1A0A0U1RR11 272 aa6.88□□□□□ -1.31
CLIP1-207ENST00000536634 KIAA0391O15091 583 aaKnown RBP6.88□□□□□ -1.31
CLIP1-207ENST00000536634 NDUFA10O95299 355 aa6.88□□□□□ -1.31
CLIP1-207ENST00000536634 RECQLP46063 649 aaPredicted RBP6.88□□□□□ -1.31
CLIP1-207ENST00000536634 ZNF280AP59817 542 aaPredicted RBP6.88□□□□□ -1.31
CLIP1-207ENST00000536634 TIGD2Q4W5G0 525 aa6.88□□□□□ -1.31
CLIP1-207ENST00000536634 TSHZ3Q63HK5 1081 aa6.88□□□□□ -1.31
CLIP1-207ENST00000536634 PROKR1Q8TCW9 393 aa6.88□□□□□ -1.31
CLIP1-207ENST00000536634 CHMP4CQ96CF2 233 aa6.88□□□□□ -1.31
CLIP1-207ENST00000536634 MYEOVQ96EZ4 313 aa6.88□□□□□ -1.31
CLIP1-207ENST00000536634 MRGPRX4Q96LA9 322 aa6.88□□□□□ -1.31
CLIP1-207ENST00000536634 DMRTA2Q96SC8 542 aa6.88□□□□□ -1.31
CLIP1-207ENST00000536634 ZSWIM1Q9BR11 485 aa6.88□□□□□ -1.31
CLIP1-207ENST00000536634 C11orf54Q9H0W9 315 aaPredicted RBP6.88□□□□□ -1.31
CLIP1-207ENST00000536634 DDX56Q9NY93 547 aaKnown RBP6.88□□□□□ -1.31
CLIP1-207ENST00000536634 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.88□□□□□ -1.31
CLIP1-207ENST00000536634 GAGE12BA1L429 117 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 GAGE12HA6NDE8 117 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 TMEM200CA6NKL6 621 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 MARCH11A6NNE9 402 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 ERVV-2B6SEH9 535 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 PPM1GO15355 546 aaPredicted RBP6.87□□□□□ -1.31
CLIP1-207ENST00000536634 SGTAO43765 313 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 SNUPNO95149 360 aaKnown RBP6.87□□□□□ -1.31
CLIP1-207ENST00000536634 ELANEP08246 267 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 SBK3P0C264 359 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 KRT4P19013 534 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 SLC6A4P31645 630 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 RGS19P49795 217 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 NEK2P51955 445 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 IGBP1P78318 339 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 DACT2Q5SW24 774 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 KCNV1Q6PIU1 500 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 ZBTB46Q86UZ6 589 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 CLPTM1LQ96KA5 538 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 GSTO2Q9H4Y5 243 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 ANKFY1Q9P2R3 1169 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 DKK2Q9UBU2 259 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 LUC7L2Q9Y383 392 aaKnown RBP6.87□□□□□ -1.31
CLIP1-207ENST00000536634 CACNA1SQ13698 1873 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 ADAMTSL1Q8N6G6 1762 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 THSD7BQ9C0I4 1608 aa6.87□□□□□ -1.31
CLIP1-207ENST00000536634 CDHR4A6H8M9 788 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 DDNO94850 711 aaPredicted RBP6.86□□□□□ -1.31
CLIP1-207ENST00000536634 ABHD16AO95870 558 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 PDGFRBP09619 1106 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 SPATA31D3P0C874 917 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 GCSHP23434 173 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 DSC2Q02487 901 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 KRTAP1-1Q07627 177 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 SPATA31D4Q6ZUB0 917 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 LDLRAD3Q86YD5 345 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 C2CD5Q86YS7 1000 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 VRK3Q8IV63 474 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 CPA6Q8N4T0 437 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 AMER2Q8N7J2 671 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 CPEB3Q8NE35 698 aaKnown RBP6.86□□□□□ -1.31
CLIP1-207ENST00000536634 NSUN6Q8TEA1 469 aaKnown RBP6.86□□□□□ -1.31
CLIP1-207ENST00000536634 ADAM2Q99965 735 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 MRIQ9BWK5 157 aa6.86□□□□□ -1.31
CLIP1-207ENST00000536634 TYW1Q9NV66 732 aaKnown RBP6.86□□□□□ -1.31
CLIP1-207ENST00000536634 ATP11BQ9Y2G3 1177 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms